==512172== Memcheck, a memory error detector ==512172== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512172== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512172== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==512172== Parent PID: 496273 ==512172== ==512172== ==512172== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512172== Open file descriptor 12: ==512172== at 0x10BA026D: pipe (pipe.c:29) ==512172== by 0x1B37507D: ??? ==512172== by 0x155194CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512172== by 0x104A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512172== by 0x10441D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512172== by 0xF138D38: PetscInitialize (pinit.c:924) ==512172== by 0xEFA72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512172== by 0xEFA732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512172== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512172== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512172== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512172== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512172== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512172== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==512172== ==512172== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512172== at 0x10BA4C0C: __open_nocancel (open64_nocancel.c:39) ==512172== by 0x10B28BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512172== by 0xEFDC822: ??? ==512172== by 0xEFDC96F: ??? ==512172== by 0x155BE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512172== by 0x155BE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512172== by 0x15574922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512172== by 0x155192DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512172== by 0x104A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512172== by 0x10441D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512172== by 0xF138D38: PetscInitialize (pinit.c:924) ==512172== by 0xEFA72DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512172== by 0xEFA732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512172== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512172== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512172== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512172== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512172== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512172== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==512172== ==512172== Open file descriptor 115: ==512172== ==512172== ==512172== Open file descriptor 110: ==512172== ==512172== ==512172== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==512172== ==512172== ==512172== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512172== ==512172== ==512172== ==512172== HEAP SUMMARY: ==512172== in use at exit: 995,660 bytes in 13,915 blocks ==512172== total heap usage: 874,669 allocs, 860,754 frees, 1,693,991,715 bytes allocated ==512172== ==512172== LEAK SUMMARY: ==512172== definitely lost: 0 bytes in 0 blocks ==512172== indirectly lost: 0 bytes in 0 blocks ==512172== possibly lost: 0 bytes in 0 blocks ==512172== still reachable: 120 bytes in 4 blocks ==512172== suppressed: 995,540 bytes in 13,911 blocks ==512172== Reachable blocks (those to which a pointer was found) are not shown. ==512172== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512172== ==512172== For lists of detected and suppressed errors, rerun with: -s ==512172== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)