==512346== Memcheck, a memory error detector ==512346== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512346== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512346== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOffLatticeCryptProjectionSimulation -malloc_debug -malloc_dump -memory_info ==512346== Parent PID: 496273 ==512346== ==512346== ==512346== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512346== Open file descriptor 12: ==512346== at 0x1265D26D: pipe (pipe.c:29) ==512346== by 0x1B37307D: ??? ==512346== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512346== by 0x11E7E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512346== by 0x11E17D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512346== by 0x10AE8D38: PetscInitialize (pinit.c:924) ==512346== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512346== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512346== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512346== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512346== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512346== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512346== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512346== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==512346== ==512346== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512346== at 0x12661C0C: __open_nocancel (open64_nocancel.c:39) ==512346== by 0x125E5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512346== by 0x11D72822: ??? ==512346== by 0x11D7296F: ??? ==512346== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512346== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512346== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512346== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512346== by 0x11E7E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512346== by 0x11E17D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512346== by 0x10AE8D38: PetscInitialize (pinit.c:924) ==512346== by 0x109BF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512346== by 0x109BF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512346== by 0x135AC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512346== by 0x12F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512346== by 0x131D16: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512346== by 0x131BB6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512346== by 0x13224D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512346== by 0x12D735: main (TestOffLatticeCryptProjectionSimulation.cpp:19) ==512346== ==512346== Open file descriptor 115: ==512346== ==512346== ==512346== Open file descriptor 110: ==512346== ==512346== ==512346== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeCryptProjectionSimulation_valgrind.txt ==512346== ==512346== ==512346== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512346== ==512346== ==512346== ==512346== HEAP SUMMARY: ==512346== in use at exit: 995,596 bytes in 13,914 blocks ==512346== total heap usage: 1,357,223 allocs, 1,343,309 frees, 1,686,301,988 bytes allocated ==512346== ==512346== LEAK SUMMARY: ==512346== definitely lost: 0 bytes in 0 blocks ==512346== indirectly lost: 0 bytes in 0 blocks ==512346== possibly lost: 0 bytes in 0 blocks ==512346== still reachable: 56 bytes in 3 blocks ==512346== suppressed: 995,540 bytes in 13,911 blocks ==512346== Reachable blocks (those to which a pointer was found) are not shown. ==512346== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512346== ==512346== For lists of detected and suppressed errors, rerun with: -s ==512346== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)