==498517== Memcheck, a memory error detector ==498517== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498517== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498517== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==498517== Parent PID: 496273 ==498517== ==498517== ==498517== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498517== Open file descriptor 12: ==498517== at 0xF92A26D: pipe (pipe.c:29) ==498517== by 0x196B107D: ??? ==498517== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498517== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498517== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498517== by 0x10216D38: PetscInitialize (pinit.c:924) ==498517== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498517== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498517== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498517== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498517== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498517== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498517== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498517== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==498517== ==498517== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498517== at 0xF92EC0C: __open_nocancel (open64_nocancel.c:39) ==498517== by 0xF8B2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498517== by 0xF134822: ??? ==498517== by 0xF13496F: ??? ==498517== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498517== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498517== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498517== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498517== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498517== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498517== by 0x10216D38: PetscInitialize (pinit.c:924) ==498517== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498517== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498517== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498517== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498517== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498517== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498517== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498517== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==498517== ==498517== Open file descriptor 115: ==498517== ==498517== ==498517== Open file descriptor 110: ==498517== ==498517== ==498517== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==498517== ==498517== ==498517== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498517== ==498517== ==498517== ==498517== HEAP SUMMARY: ==498517== in use at exit: 995,556 bytes in 13,911 blocks ==498517== total heap usage: 17,985,368 allocs, 17,971,457 frees, 30,304,682,085 bytes allocated ==498517== ==498517== LEAK SUMMARY: ==498517== definitely lost: 0 bytes in 0 blocks ==498517== indirectly lost: 0 bytes in 0 blocks ==498517== possibly lost: 0 bytes in 0 blocks ==498517== still reachable: 88 bytes in 4 blocks ==498517== suppressed: 995,468 bytes in 13,907 blocks ==498517== Reachable blocks (those to which a pointer was found) are not shown. ==498517== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498517== ==498517== For lists of detected and suppressed errors, rerun with: -s ==498517== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)