==498699== Memcheck, a memory error detector ==498699== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498699== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498699== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==498699== Parent PID: 496273 ==498699== ==498699== ==498699== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498699== Open file descriptor 12: ==498699== at 0xFCC726D: pipe (pipe.c:29) ==498699== by 0x196B107D: ??? ==498699== by 0x14CB84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498699== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498699== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498699== by 0x10216D38: PetscInitialize (pinit.c:924) ==498699== by 0xF49C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498699== by 0xF49C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498699== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498699== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498699== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498699== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498699== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498699== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==498699== ==498699== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498699== at 0xFCCBC0C: __open_nocancel (open64_nocancel.c:39) ==498699== by 0xFC4FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498699== by 0xF4D1822: ??? ==498699== by 0xF4D196F: ??? ==498699== by 0x14D5D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498699== by 0x14D5D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498699== by 0x14D13922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498699== by 0x14CB82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498699== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498699== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498699== by 0x10216D38: PetscInitialize (pinit.c:924) ==498699== by 0xF49C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498699== by 0xF49C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498699== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498699== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498699== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498699== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498699== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498699== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==498699== ==498699== Open file descriptor 115: ==498699== ==498699== ==498699== Open file descriptor 110: ==498699== ==498699== ==498699== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==498699== ==498699== ==498699== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498699== ==498699== ==498699== ==498699== HEAP SUMMARY: ==498699== in use at exit: 995,524 bytes in 13,910 blocks ==498699== total heap usage: 7,499,348 allocs, 7,485,438 frees, 2,876,039,190 bytes allocated ==498699== ==498699== LEAK SUMMARY: ==498699== definitely lost: 0 bytes in 0 blocks ==498699== indirectly lost: 0 bytes in 0 blocks ==498699== possibly lost: 0 bytes in 0 blocks ==498699== still reachable: 56 bytes in 3 blocks ==498699== suppressed: 995,468 bytes in 13,907 blocks ==498699== Reachable blocks (those to which a pointer was found) are not shown. ==498699== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498699== ==498699== For lists of detected and suppressed errors, rerun with: -s ==498699== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)