==498844== Memcheck, a memory error detector ==498844== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498844== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498844== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==498844== Parent PID: 496273 ==498844== ==498844== ==498844== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498844== Open file descriptor 12: ==498844== at 0xFDA626D: pipe (pipe.c:29) ==498844== by 0x196B107D: ??? ==498844== by 0x14DDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498844== by 0x11A02418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498844== by 0x1199BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498844== by 0x10692D38: PetscInitialize (pinit.c:924) ==498844== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498844== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498844== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498844== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498844== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498844== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498844== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498844== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==498844== ==498844== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498844== at 0xFDAAC0C: __open_nocancel (open64_nocancel.c:39) ==498844== by 0xFD2EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498844== by 0xF134822: ??? ==498844== by 0xF13496F: ??? ==498844== by 0x14E816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498844== by 0x14E81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498844== by 0x14E37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498844== by 0x14DDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498844== by 0x11A02418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498844== by 0x1199BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498844== by 0x10692D38: PetscInitialize (pinit.c:924) ==498844== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498844== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498844== by 0x1D4486: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498844== by 0x1CDDB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498844== by 0x1D1554: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498844== by 0x1D13F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498844== by 0x1D1A8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498844== by 0x1CC1D5: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==498844== ==498844== Open file descriptor 115: ==498844== ==498844== ==498844== Open file descriptor 110: ==498844== ==498844== ==498844== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==498844== ==498844== ==498844== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498844== ==498844== ==498844== ==498844== HEAP SUMMARY: ==498844== in use at exit: 995,524 bytes in 13,910 blocks ==498844== total heap usage: 7,109,069 allocs, 7,095,159 frees, 8,315,280,265 bytes allocated ==498844== ==498844== LEAK SUMMARY: ==498844== definitely lost: 0 bytes in 0 blocks ==498844== indirectly lost: 0 bytes in 0 blocks ==498844== possibly lost: 0 bytes in 0 blocks ==498844== still reachable: 56 bytes in 3 blocks ==498844== suppressed: 995,468 bytes in 13,907 blocks ==498844== Reachable blocks (those to which a pointer was found) are not shown. ==498844== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498844== ==498844== For lists of detected and suppressed errors, rerun with: -s ==498844== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)