==501809== Memcheck, a memory error detector ==501809== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==501809== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==501809== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==501809== Parent PID: 496273 ==501809== ==501809== ==501809== FILE DESCRIPTORS: 9 open (3 std) at exit. ==501809== Open file descriptor 12: ==501809== at 0xF92A26D: pipe (pipe.c:29) ==501809== by 0x196B107D: ??? ==501809== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==501809== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==501809== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==501809== by 0x10216D38: PetscInitialize (pinit.c:924) ==501809== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==501809== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==501809== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==501809== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==501809== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==501809== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==501809== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==501809== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==501809== ==501809== Open file descriptor 8: /dev/shm/open_mpi.0000 ==501809== at 0xF92EC0C: __open_nocancel (open64_nocancel.c:39) ==501809== by 0xF8B2BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==501809== by 0xF134822: ??? ==501809== by 0xF13496F: ??? ==501809== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==501809== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==501809== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==501809== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==501809== by 0x11586418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==501809== by 0x1151FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==501809== by 0x10216D38: PetscInitialize (pinit.c:924) ==501809== by 0xF0FF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==501809== by 0xF0FF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==501809== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==501809== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==501809== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==501809== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==501809== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==501809== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==501809== ==501809== Open file descriptor 115: ==501809== ==501809== ==501809== Open file descriptor 110: ==501809== ==501809== ==501809== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==501809== ==501809== ==501809== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==501809== ==501809== ==501809== ==501809== HEAP SUMMARY: ==501809== in use at exit: 995,540 bytes in 13,911 blocks ==501809== total heap usage: 11,694,809 allocs, 11,680,898 frees, 2,441,622,239 bytes allocated ==501809== ==501809== LEAK SUMMARY: ==501809== definitely lost: 0 bytes in 0 blocks ==501809== indirectly lost: 0 bytes in 0 blocks ==501809== possibly lost: 0 bytes in 0 blocks ==501809== still reachable: 72 bytes in 4 blocks ==501809== suppressed: 995,468 bytes in 13,907 blocks ==501809== Reachable blocks (those to which a pointer was found) are not shown. ==501809== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==501809== ==501809== For lists of detected and suppressed errors, rerun with: -s ==501809== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)