==512099== Memcheck, a memory error detector ==512099== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512099== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512099== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==512099== Parent PID: 496273 ==512099== ==512099== ==512099== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512099== Open file descriptor 12: ==512099== at 0xFB9C26D: pipe (pipe.c:29) ==512099== by 0x196B107D: ??? ==512099== by 0x14CB84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512099== by 0x1149F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512099== by 0x11438D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512099== by 0x1012DD38: PetscInitialize (pinit.c:924) ==512099== by 0xF49C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512099== by 0xF49C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512099== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==512099== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512099== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512099== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512099== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512099== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==512099== ==512099== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512099== at 0xFBA0C0C: __open_nocancel (open64_nocancel.c:39) ==512099== by 0xFB24BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512099== by 0xF4D1822: ??? ==512099== by 0xF4D196F: ??? ==512099== by 0x14D5D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512099== by 0x14D5D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512099== by 0x14D13922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512099== by 0x14CB82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512099== by 0x1149F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512099== by 0x11438D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512099== by 0x1012DD38: PetscInitialize (pinit.c:924) ==512099== by 0xF49C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512099== by 0xF49C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512099== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==512099== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512099== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512099== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512099== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512099== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==512099== ==512099== Open file descriptor 115: ==512099== ==512099== ==512099== Open file descriptor 110: ==512099== ==512099== ==512099== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==512099== ==512099== ==512099== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512099== ==512099== ==512099== ==512099== HEAP SUMMARY: ==512099== in use at exit: 995,524 bytes in 13,910 blocks ==512099== total heap usage: 2,096,849 allocs, 2,082,939 frees, 1,907,953,772 bytes allocated ==512099== ==512099== LEAK SUMMARY: ==512099== definitely lost: 0 bytes in 0 blocks ==512099== indirectly lost: 0 bytes in 0 blocks ==512099== possibly lost: 0 bytes in 0 blocks ==512099== still reachable: 56 bytes in 3 blocks ==512099== suppressed: 995,468 bytes in 13,907 blocks ==512099== Reachable blocks (those to which a pointer was found) are not shown. ==512099== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512099== ==512099== For lists of detected and suppressed errors, rerun with: -s ==512099== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)