==1059495== Memcheck, a memory error detector ==1059495== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1059495== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1059495== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1059495== Parent PID: 1057962 ==1059495== ==1059495== ==1059495== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1059495== Open file descriptor 12: ==1059495== at 0xD2EAE8D: pipe (pipe.c:29) ==1059495== by 0x18A1A07D: ??? ==1059495== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1059495== by 0x10812418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059495== by 0x107ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059495== by 0xF4A2D38: PetscInitialize (pinit.c:924) ==1059495== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1059495== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1059495== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1059495== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1059495== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1059495== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1059495== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1059495== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1059495== ==1059495== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1059495== at 0xD2EF82C: __open_nocancel (open64_nocancel.c:39) ==1059495== by 0xD273BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1059495== by 0xCBDA822: ??? ==1059495== by 0xCBDA96F: ??? ==1059495== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059495== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059495== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059495== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1059495== by 0x10812418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059495== by 0x107ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059495== by 0xF4A2D38: PetscInitialize (pinit.c:924) ==1059495== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1059495== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1059495== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1059495== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1059495== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1059495== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1059495== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1059495== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1059495== ==1059495== Open file descriptor 116: ==1059495== ==1059495== ==1059495== Open file descriptor 112: ==1059495== ==1059495== ==1059495== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1059495== ==1059495== ==1059495== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1059495== ==1059495== ==1059495== ==1059495== HEAP SUMMARY: ==1059495== in use at exit: 835,633 bytes in 11,677 blocks ==1059495== total heap usage: 63,566 allocs, 51,889 frees, 1,540,879,310 bytes allocated ==1059495== ==1059495== LEAK SUMMARY: ==1059495== definitely lost: 0 bytes in 0 blocks ==1059495== indirectly lost: 0 bytes in 0 blocks ==1059495== possibly lost: 0 bytes in 0 blocks ==1059495== still reachable: 56 bytes in 3 blocks ==1059495== suppressed: 835,577 bytes in 11,674 blocks ==1059495== Reachable blocks (those to which a pointer was found) are not shown. ==1059495== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1059495== ==1059495== For lists of detected and suppressed errors, rerun with: -s ==1059495== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)