==1059521== Memcheck, a memory error detector ==1059521== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1059521== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1059521== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationBoundaryConditions -malloc_debug -malloc_dump -memory_info ==1059521== Parent PID: 1057962 ==1059521== ==1059521== ==1059521== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1059521== Open file descriptor 12: ==1059521== at 0xEC9CE8D: pipe (pipe.c:29) ==1059521== by 0x18A1A07D: ??? ==1059521== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1059521== by 0x108F9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059521== by 0x10892D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059521== by 0xF589D38: PetscInitialize (pinit.c:924) ==1059521== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1059521== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1059521== by 0x1540EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1059521== by 0x14CBDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1059521== by 0x14FA32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1059521== by 0x14F8D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1059521== by 0x14FF69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1059521== by 0x14B005: main (TestCellPopulationBoundaryConditions.cpp:19) ==1059521== ==1059521== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1059521== at 0xECA182C: __open_nocancel (open64_nocancel.c:39) ==1059521== by 0xEC25BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1059521== by 0xE4A5822: ??? ==1059521== by 0xE4A596F: ??? ==1059521== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059521== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059521== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1059521== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1059521== by 0x108F9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059521== by 0x10892D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1059521== by 0xF589D38: PetscInitialize (pinit.c:924) ==1059521== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1059521== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1059521== by 0x1540EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1059521== by 0x14CBDD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1059521== by 0x14FA32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1059521== by 0x14F8D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1059521== by 0x14FF69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1059521== by 0x14B005: main (TestCellPopulationBoundaryConditions.cpp:19) ==1059521== ==1059521== Open file descriptor 116: ==1059521== ==1059521== ==1059521== Open file descriptor 112: ==1059521== ==1059521== ==1059521== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationBoundaryConditions_valgrind.txt ==1059521== ==1059521== ==1059521== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1059521== ==1059521== ==1059521== ==1059521== HEAP SUMMARY: ==1059521== in use at exit: 835,633 bytes in 11,677 blocks ==1059521== total heap usage: 78,120 allocs, 66,443 frees, 1,544,176,841 bytes allocated ==1059521== ==1059521== LEAK SUMMARY: ==1059521== definitely lost: 0 bytes in 0 blocks ==1059521== indirectly lost: 0 bytes in 0 blocks ==1059521== possibly lost: 0 bytes in 0 blocks ==1059521== still reachable: 56 bytes in 3 blocks ==1059521== suppressed: 835,577 bytes in 11,674 blocks ==1059521== Reachable blocks (those to which a pointer was found) are not shown. ==1059521== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1059521== ==1059521== For lists of detected and suppressed errors, rerun with: -s ==1059521== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)