==1074372== Memcheck, a memory error detector ==1074372== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1074372== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1074372== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1074372== Parent PID: 1057962 ==1074372== ==1074372== ==1074372== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1074372== Open file descriptor 12: ==1074372== at 0xA603E8D: pipe (pipe.c:29) ==1074372== by 0x13F9307D: ??? ==1074372== by 0xD6404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074372== by 0x9EF2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074372== by 0x9E8BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074372== by 0xA98ED38: PetscInitialize (pinit.c:924) ==1074372== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074372== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074372== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074372== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074372== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074372== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074372== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074372== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==1074372== ==1074372== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1074372== at 0xA60882C: __open_nocancel (open64_nocancel.c:39) ==1074372== by 0xA58CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1074372== by 0x9DE4822: ??? ==1074372== by 0x9DE496F: ??? ==1074372== by 0xC5C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074372== by 0xC5C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074372== by 0xC57D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1074372== by 0xD6402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1074372== by 0x9EF2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074372== by 0x9E8BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1074372== by 0xA98ED38: PetscInitialize (pinit.c:924) ==1074372== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1074372== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1074372== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1074372== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1074372== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1074372== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1074372== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1074372== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==1074372== ==1074372== Open file descriptor 116: ==1074372== ==1074372== ==1074372== Open file descriptor 112: ==1074372== ==1074372== ==1074372== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==1074372== ==1074372== ==1074372== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1074372== ==1074372== ==1074372== ==1074372== HEAP SUMMARY: ==1074372== in use at exit: 836,028 bytes in 11,682 blocks ==1074372== total heap usage: 2,381,497 allocs, 2,369,815 frees, 2,670,162,613 bytes allocated ==1074372== ==1074372== LEAK SUMMARY: ==1074372== definitely lost: 0 bytes in 0 blocks ==1074372== indirectly lost: 0 bytes in 0 blocks ==1074372== possibly lost: 0 bytes in 0 blocks ==1074372== still reachable: 24 bytes in 2 blocks ==1074372== suppressed: 836,004 bytes in 11,680 blocks ==1074372== Reachable blocks (those to which a pointer was found) are not shown. ==1074372== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1074372== ==1074372== For lists of detected and suppressed errors, rerun with: -s ==1074372== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)