==1109040== Memcheck, a memory error detector ==1109040== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1109040== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1109040== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestMirams2010WntOdeSystem -malloc_debug -malloc_dump -memory_info ==1109040== Parent PID: 1093399 ==1109040== ==1109040== ==1109040== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1109040== Open file descriptor 12: ==1109040== at 0xEAA8E8D: pipe (pipe.c:29) ==1109040== by 0x1A6DE07D: ??? ==1109040== by 0x158EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109040== by 0x121B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109040== by 0x12152D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109040== by 0x10E49D38: PetscInitialize (pinit.c:924) ==1109040== by 0xE6A5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109040== by 0xE6A51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109040== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1109040== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109040== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109040== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109040== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109040== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==1109040== ==1109040== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1109040== at 0xEAAD82C: __open_nocancel (open64_nocancel.c:39) ==1109040== by 0xEA31BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1109040== by 0xE6DF822: ??? ==1109040== by 0xE6DF96F: ??? ==1109040== by 0x159916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109040== by 0x15991938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109040== by 0x15947922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109040== by 0x158EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109040== by 0x121B9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109040== by 0x12152D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109040== by 0x10E49D38: PetscInitialize (pinit.c:924) ==1109040== by 0xE6A5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109040== by 0xE6A51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109040== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1109040== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109040== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109040== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109040== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109040== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==1109040== ==1109040== Open file descriptor 116: ==1109040== ==1109040== ==1109040== Open file descriptor 112: ==1109040== ==1109040== ==1109040== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMirams2010WntOdeSystem_valgrind.txt ==1109040== ==1109040== ==1109040== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1109040== ==1109040== ==1109040== ==1109040== HEAP SUMMARY: ==1109040== in use at exit: 835,649 bytes in 11,677 blocks ==1109040== total heap usage: 74,656 allocs, 62,979 frees, 1,542,068,141 bytes allocated ==1109040== ==1109040== LEAK SUMMARY: ==1109040== definitely lost: 0 bytes in 0 blocks ==1109040== indirectly lost: 0 bytes in 0 blocks ==1109040== possibly lost: 0 bytes in 0 blocks ==1109040== still reachable: 56 bytes in 3 blocks ==1109040== suppressed: 835,593 bytes in 11,674 blocks ==1109040== Reachable blocks (those to which a pointer was found) are not shown. ==1109040== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1109040== ==1109040== For lists of detected and suppressed errors, rerun with: -s ==1109040== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)