==1095368== Memcheck, a memory error detector ==1095368== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1095368== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1095368== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1095368== Parent PID: 1093399 ==1095368== ==1095368== ==1095368== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1095368== Open file descriptor 12: ==1095368== at 0xEC9CE8D: pipe (pipe.c:29) ==1095368== by 0x18A1A07D: ??? ==1095368== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1095368== by 0x108F9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1095368== by 0x10892D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1095368== by 0xF589D38: PetscInitialize (pinit.c:924) ==1095368== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1095368== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1095368== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1095368== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1095368== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1095368== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1095368== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1095368== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1095368== ==1095368== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1095368== at 0xECA182C: __open_nocancel (open64_nocancel.c:39) ==1095368== by 0xEC25BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1095368== by 0xE4A5822: ??? ==1095368== by 0xE4A596F: ??? ==1095368== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1095368== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1095368== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1095368== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1095368== by 0x108F9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1095368== by 0x10892D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1095368== by 0xF589D38: PetscInitialize (pinit.c:924) ==1095368== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1095368== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1095368== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1095368== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1095368== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1095368== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1095368== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1095368== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1095368== ==1095368== Open file descriptor 116: ==1095368== ==1095368== ==1095368== Open file descriptor 112: ==1095368== ==1095368== ==1095368== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==1095368== ==1095368== ==1095368== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1095368== ==1095368== ==1095368== ==1095368== HEAP SUMMARY: ==1095368== in use at exit: 835,596 bytes in 11,674 blocks ==1095368== total heap usage: 17,964,718 allocs, 17,953,044 frees, 30,277,329,583 bytes allocated ==1095368== ==1095368== LEAK SUMMARY: ==1095368== definitely lost: 0 bytes in 0 blocks ==1095368== indirectly lost: 0 bytes in 0 blocks ==1095368== possibly lost: 0 bytes in 0 blocks ==1095368== still reachable: 88 bytes in 4 blocks ==1095368== suppressed: 835,508 bytes in 11,670 blocks ==1095368== Reachable blocks (those to which a pointer was found) are not shown. ==1095368== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1095368== ==1095368== For lists of detected and suppressed errors, rerun with: -s ==1095368== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)