==1109041== Memcheck, a memory error detector ==1109041== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1109041== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1109041== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1109041== Parent PID: 1093399 ==1109041== ==1109041== ==1109041== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1109041== Open file descriptor 12: ==1109041== at 0x11B6DE8D: pipe (pipe.c:29) ==1109041== by 0x1A6DC07D: ??? ==1109041== by 0x1589F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109041== by 0x11476418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109041== by 0x1140FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109041== by 0x10106D38: PetscInitialize (pinit.c:924) ==1109041== by 0xFF6E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109041== by 0xFF6E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109041== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1109041== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109041== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109041== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109041== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109041== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1109041== ==1109041== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1109041== at 0x11B7282C: __open_nocancel (open64_nocancel.c:39) ==1109041== by 0x11AF6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1109041== by 0xFFA8822: ??? ==1109041== by 0xFFA896F: ??? ==1109041== by 0x159446DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109041== by 0x15944938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109041== by 0x158FA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1109041== by 0x1589F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1109041== by 0x11476418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109041== by 0x1140FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1109041== by 0x10106D38: PetscInitialize (pinit.c:924) ==1109041== by 0xFF6E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1109041== by 0xFF6E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1109041== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1109041== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1109041== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1109041== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1109041== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1109041== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1109041== ==1109041== Open file descriptor 116: ==1109041== ==1109041== ==1109041== Open file descriptor 112: ==1109041== ==1109041== ==1109041== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==1109041== ==1109041== ==1109041== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1109041== ==1109041== ==1109041== ==1109041== HEAP SUMMARY: ==1109041== in use at exit: 835,617 bytes in 11,676 blocks ==1109041== total heap usage: 527,283 allocs, 515,607 frees, 1,748,818,101 bytes allocated ==1109041== ==1109041== LEAK SUMMARY: ==1109041== definitely lost: 0 bytes in 0 blocks ==1109041== indirectly lost: 0 bytes in 0 blocks ==1109041== possibly lost: 0 bytes in 0 blocks ==1109041== still reachable: 24 bytes in 2 blocks ==1109041== suppressed: 835,593 bytes in 11,674 blocks ==1109041== Reachable blocks (those to which a pointer was found) are not shown. ==1109041== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1109041== ==1109041== For lists of detected and suppressed errors, rerun with: -s ==1109041== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)