==1099733== Memcheck, a memory error detector ==1099733== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1099733== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1099733== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1099733== Parent PID: 1090844 ==1099733== ==1099733== ==1099733== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1099733== Open file descriptor 12: ==1099733== at 0x1181926D: pipe (pipe.c:29) ==1099733== by 0x1A79E07D: ??? ==1099733== by 0x1593C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1099733== by 0x11466418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1099733== by 0x113FFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1099733== by 0x100F6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1099733== by 0xFF69153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1099733== by 0xFF691A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1099733== by 0x136A09: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1099733== by 0x1312FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1099733== by 0x134048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1099733== by 0x133EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1099733== by 0x13457F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1099733== by 0x12F725: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1099733== ==1099733== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1099733== at 0x1181DC0C: __open_nocancel (open64_nocancel.c:39) ==1099733== by 0x117A1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1099733== by 0xFF9D822: ??? ==1099733== by 0xFF9D96F: ??? ==1099733== by 0x159E16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1099733== by 0x159E1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1099733== by 0x15997922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1099733== by 0x1593C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1099733== by 0x11466418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1099733== by 0x113FFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1099733== by 0x100F6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1099733== by 0xFF69153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1099733== by 0xFF691A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1099733== by 0x136A09: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1099733== by 0x1312FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1099733== by 0x134048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1099733== by 0x133EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1099733== by 0x13457F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1099733== by 0x12F725: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==1099733== ==1099733== Open file descriptor 115: ==1099733== ==1099733== ==1099733== Open file descriptor 112: ==1099733== ==1099733== ==1099733== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==1099733== ==1099733== ==1099733== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1099733== ==1099733== ==1099733== ==1099733== HEAP SUMMARY: ==1099733== in use at exit: 858,008 bytes in 12,112 blocks ==1099733== total heap usage: 527,568 allocs, 515,456 frees, 1,751,542,243 bytes allocated ==1099733== ==1099733== LEAK SUMMARY: ==1099733== definitely lost: 0 bytes in 0 blocks ==1099733== indirectly lost: 0 bytes in 0 blocks ==1099733== possibly lost: 0 bytes in 0 blocks ==1099733== still reachable: 24 bytes in 2 blocks ==1099733== suppressed: 857,984 bytes in 12,110 blocks ==1099733== Reachable blocks (those to which a pointer was found) are not shown. ==1099733== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1099733== ==1099733== For lists of detected and suppressed errors, rerun with: -s ==1099733== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)