==1131583== Memcheck, a memory error detector ==1131583== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1131583== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1131583== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==1131583== Parent PID: 1130400 ==1131583== ==1131583== ==1131583== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1131583== Open file descriptor 12: ==1131583== at 0xE44C26D: pipe (pipe.c:29) ==1131583== by 0x18ADF07D: ??? ==1131583== by 0x12C244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1131583== by 0xE09B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1131583== by 0xE034D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1131583== by 0xCD2BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1131583== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1131583== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1131583== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1131583== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1131583== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1131583== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1131583== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1131583== by 0x125225: main (TestCellMutationStates.cpp:19) ==1131583== ==1131583== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1131583== at 0xE450C0C: __open_nocancel (open64_nocancel.c:39) ==1131583== by 0xE3D4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1131583== by 0xCBD0822: ??? ==1131583== by 0xCBD096F: ??? ==1131583== by 0x12CC96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1131583== by 0x12CC9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1131583== by 0x12C7F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1131583== by 0x12C242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1131583== by 0xE09B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1131583== by 0xE034D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1131583== by 0xCD2BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1131583== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1131583== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1131583== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1131583== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1131583== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1131583== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1131583== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1131583== by 0x125225: main (TestCellMutationStates.cpp:19) ==1131583== ==1131583== Open file descriptor 115: ==1131583== ==1131583== ==1131583== Open file descriptor 112: ==1131583== ==1131583== ==1131583== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==1131583== ==1131583== ==1131583== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1131583== ==1131583== ==1131583== ==1131583== HEAP SUMMARY: ==1131583== in use at exit: 858,024 bytes in 12,113 blocks ==1131583== total heap usage: 61,271 allocs, 49,158 frees, 1,543,344,949 bytes allocated ==1131583== ==1131583== LEAK SUMMARY: ==1131583== definitely lost: 0 bytes in 0 blocks ==1131583== indirectly lost: 0 bytes in 0 blocks ==1131583== possibly lost: 0 bytes in 0 blocks ==1131583== still reachable: 56 bytes in 3 blocks ==1131583== suppressed: 857,968 bytes in 12,110 blocks ==1131583== Reachable blocks (those to which a pointer was found) are not shown. ==1131583== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1131583== ==1131583== For lists of detected and suppressed errors, rerun with: -s ==1131583== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)