==1138851== Memcheck, a memory error detector ==1138851== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1138851== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1138851== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==1138851== Parent PID: 1130400 ==1138851== ==1138851== ==1138851== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1138851== Open file descriptor 12: ==1138851== at 0xFDFE26D: pipe (pipe.c:29) ==1138851== by 0x18ADF07D: ??? ==1138851== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1138851== by 0xF964418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1138851== by 0xF8FDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1138851== by 0xE5F4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1138851== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1138851== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1138851== by 0x225853: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1138851== by 0x21F26B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1138851== by 0x222ABC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1138851== by 0x22295D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1138851== by 0x222FF3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1138851== by 0x21BB95: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1138851== ==1138851== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1138851== at 0xFE02C0C: __open_nocancel (open64_nocancel.c:39) ==1138851== by 0xFD86BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1138851== by 0xE49B822: ??? ==1138851== by 0xE49B96F: ??? ==1138851== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1138851== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1138851== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1138851== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1138851== by 0xF964418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1138851== by 0xF8FDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1138851== by 0xE5F4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1138851== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1138851== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1138851== by 0x225853: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1138851== by 0x21F26B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1138851== by 0x222ABC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1138851== by 0x22295D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1138851== by 0x222FF3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1138851== by 0x21BB95: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1138851== ==1138851== Open file descriptor 115: ==1138851== ==1138851== ==1138851== Open file descriptor 112: ==1138851== ==1138851== ==1138851== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==1138851== ==1138851== ==1138851== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1138851== ==1138851== ==1138851== ==1138851== HEAP SUMMARY: ==1138851== in use at exit: 857,961 bytes in 12,109 blocks ==1138851== total heap usage: 8,985,129 allocs, 8,973,020 frees, 2,389,034,313 bytes allocated ==1138851== ==1138851== LEAK SUMMARY: ==1138851== definitely lost: 0 bytes in 0 blocks ==1138851== indirectly lost: 0 bytes in 0 blocks ==1138851== possibly lost: 0 bytes in 0 blocks ==1138851== still reachable: 56 bytes in 3 blocks ==1138851== suppressed: 857,905 bytes in 12,106 blocks ==1138851== Reachable blocks (those to which a pointer was found) are not shown. ==1138851== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1138851== ==1138851== For lists of detected and suppressed errors, rerun with: -s ==1138851== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)