==1232116== Memcheck, a memory error detector ==1232116== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1232116== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1232116== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==1232116== Parent PID: 1230213 ==1232116== ==1232116== ==1232116== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1232116== Open file descriptor 12: ==1232116== at 0xF801E8D: pipe (pipe.c:29) ==1232116== by 0x196AB07D: ??? ==1232116== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1232116== by 0x114A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232116== by 0x1143BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232116== by 0x10132D38: PetscInitialize (pinit.c:924) ==1232116== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1232116== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1232116== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1232116== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1232116== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1232116== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1232116== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1232116== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1232116== ==1232116== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1232116== at 0xF80682C: __open_nocancel (open64_nocancel.c:39) ==1232116== by 0xF78ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1232116== by 0xF135822: ??? ==1232116== by 0xF13596F: ??? ==1232116== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1232116== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1232116== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1232116== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1232116== by 0x114A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232116== by 0x1143BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232116== by 0x10132D38: PetscInitialize (pinit.c:924) ==1232116== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1232116== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1232116== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1232116== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1232116== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1232116== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1232116== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1232116== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==1232116== ==1232116== Open file descriptor 116: ==1232116== ==1232116== ==1232116== Open file descriptor 112: ==1232116== ==1232116== ==1232116== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==1232116== ==1232116== ==1232116== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1232116== ==1232116== ==1232116== ==1232116== HEAP SUMMARY: ==1232116== in use at exit: 835,633 bytes in 11,677 blocks ==1232116== total heap usage: 1,133,515 allocs, 1,121,838 frees, 1,617,777,925 bytes allocated ==1232116== ==1232116== LEAK SUMMARY: ==1232116== definitely lost: 0 bytes in 0 blocks ==1232116== indirectly lost: 0 bytes in 0 blocks ==1232116== possibly lost: 0 bytes in 0 blocks ==1232116== still reachable: 56 bytes in 3 blocks ==1232116== suppressed: 835,577 bytes in 11,674 blocks ==1232116== Reachable blocks (those to which a pointer was found) are not shown. ==1232116== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1232116== ==1232116== For lists of detected and suppressed errors, rerun with: -s ==1232116== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)