==1232014== Memcheck, a memory error detector ==1232014== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1232014== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1232014== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==1232014== Parent PID: 1230213 ==1232014== ==1232014== ==1232014== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1232014== Open file descriptor 12: ==1232014== at 0x10D9FE8D: pipe (pipe.c:29) ==1232014== by 0x196AB07D: ??? ==1232014== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1232014== by 0x105C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232014== by 0x1055AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232014== by 0xF223D38: PetscInitialize (pinit.c:924) ==1232014== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1232014== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1232014== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1232014== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1232014== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1232014== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1232014== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1232014== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==1232014== ==1232014== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1232014== at 0x10DA482C: __open_nocancel (open64_nocancel.c:39) ==1232014== by 0x10D28BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1232014== by 0x104B3822: ??? ==1232014== by 0x104B396F: ??? ==1232014== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1232014== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1232014== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1232014== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1232014== by 0x105C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232014== by 0x1055AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1232014== by 0xF223D38: PetscInitialize (pinit.c:924) ==1232014== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1232014== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1232014== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1232014== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1232014== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1232014== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1232014== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1232014== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==1232014== ==1232014== Open file descriptor 116: ==1232014== ==1232014== ==1232014== Open file descriptor 112: ==1232014== ==1232014== ==1232014== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==1232014== ==1232014== ==1232014== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1232014== ==1232014== ==1232014== ==1232014== HEAP SUMMARY: ==1232014== in use at exit: 835,633 bytes in 11,677 blocks ==1232014== total heap usage: 230,065 allocs, 218,388 frees, 1,565,427,577 bytes allocated ==1232014== ==1232014== LEAK SUMMARY: ==1232014== definitely lost: 0 bytes in 0 blocks ==1232014== indirectly lost: 0 bytes in 0 blocks ==1232014== possibly lost: 0 bytes in 0 blocks ==1232014== still reachable: 56 bytes in 3 blocks ==1232014== suppressed: 835,577 bytes in 11,674 blocks ==1232014== Reachable blocks (those to which a pointer was found) are not shown. ==1232014== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1232014== ==1232014== For lists of detected and suppressed errors, rerun with: -s ==1232014== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)