==1233753== Memcheck, a memory error detector ==1233753== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1233753== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1233753== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1233753== Parent PID: 1230213 ==1233753== ==1233753== ==1233753== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1233753== Open file descriptor 12: ==1233753== at 0xFC87E8D: pipe (pipe.c:29) ==1233753== by 0x196AB07D: ??? ==1233753== by 0x14CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1233753== by 0x11589418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1233753== by 0x11522D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1233753== by 0x10219D38: PetscInitialize (pinit.c:924) ==1233753== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1233753== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1233753== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1233753== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1233753== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1233753== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1233753== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1233753== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1233753== ==1233753== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1233753== at 0xFC8C82C: __open_nocancel (open64_nocancel.c:39) ==1233753== by 0xFC10BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1233753== by 0xF4D2822: ??? ==1233753== by 0xF4D296F: ??? ==1233753== by 0x14D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1233753== by 0x14D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1233753== by 0x14D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1233753== by 0x14CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1233753== by 0x11589418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1233753== by 0x11522D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1233753== by 0x10219D38: PetscInitialize (pinit.c:924) ==1233753== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1233753== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1233753== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1233753== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1233753== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1233753== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1233753== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1233753== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1233753== ==1233753== Open file descriptor 116: ==1233753== ==1233753== ==1233753== Open file descriptor 112: ==1233753== ==1233753== ==1233753== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1233753== ==1233753== ==1233753== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1233753== ==1233753== ==1233753== ==1233753== HEAP SUMMARY: ==1233753== in use at exit: 835,564 bytes in 11,673 blocks ==1233753== total heap usage: 2,367,784 allocs, 2,356,111 frees, 1,978,475,795 bytes allocated ==1233753== ==1233753== LEAK SUMMARY: ==1233753== definitely lost: 0 bytes in 0 blocks ==1233753== indirectly lost: 0 bytes in 0 blocks ==1233753== possibly lost: 0 bytes in 0 blocks ==1233753== still reachable: 56 bytes in 3 blocks ==1233753== suppressed: 835,508 bytes in 11,670 blocks ==1233753== Reachable blocks (those to which a pointer was found) are not shown. ==1233753== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1233753== ==1233753== For lists of detected and suppressed errors, rerun with: -s ==1233753== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)