==1230468== Memcheck, a memory error detector ==1230468== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1230468== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1230468== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestParallelColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==1230468== Parent PID: 1230213 ==1230468== ==1230468== ==1230468== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1230468== Open file descriptor 12: ==1230468== at 0x60AFE8D: pipe (pipe.c:29) ==1230468== by 0xAF1707D: ??? ==1230468== by 0x8F464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1230468== by 0x665F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1230468== by 0x65F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1230468== by 0x4A96D38: PetscInitialize (pinit.c:924) ==1230468== by 0x496D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1230468== by 0x496D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1230468== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1230468== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1230468== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1230468== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1230468== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1230468== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==1230468== ==1230468== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1230468== at 0x60B482C: __open_nocancel (open64_nocancel.c:39) ==1230468== by 0x6038BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1230468== by 0x5D26822: ??? ==1230468== by 0x5D2696F: ??? ==1230468== by 0x8FEB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1230468== by 0x8FEB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1230468== by 0x8FA1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1230468== by 0x8F462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1230468== by 0x665F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1230468== by 0x65F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1230468== by 0x4A96D38: PetscInitialize (pinit.c:924) ==1230468== by 0x496D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1230468== by 0x496D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1230468== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1230468== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1230468== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1230468== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1230468== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1230468== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==1230468== ==1230468== Open file descriptor 116: ==1230468== ==1230468== ==1230468== Open file descriptor 112: ==1230468== ==1230468== ==1230468== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelColumnDataReaderWriter_valgrind.txt ==1230468== ==1230468== ==1230468== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1230468== ==1230468== ==1230468== ==1230468== HEAP SUMMARY: ==1230468== in use at exit: 835,153 bytes in 11,676 blocks ==1230468== total heap usage: 54,508 allocs, 42,832 frees, 1,540,534,270 bytes allocated ==1230468== ==1230468== LEAK SUMMARY: ==1230468== definitely lost: 0 bytes in 0 blocks ==1230468== indirectly lost: 0 bytes in 0 blocks ==1230468== possibly lost: 0 bytes in 0 blocks ==1230468== still reachable: 24 bytes in 2 blocks ==1230468== suppressed: 835,129 bytes in 11,674 blocks ==1230468== Reachable blocks (those to which a pointer was found) are not shown. ==1230468== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1230468== ==1230468== For lists of detected and suppressed errors, rerun with: -s ==1230468== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)