==1245916== Memcheck, a memory error detector ==1245916== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1245916== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1245916== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1245916== Parent PID: 1230213 ==1245916== ==1245916== ==1245916== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1245916== Open file descriptor 12: ==1245916== at 0xFB9EE8D: pipe (pipe.c:29) ==1245916== by 0x196AB07D: ??? ==1245916== by 0x14CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1245916== by 0x114A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1245916== by 0x1143BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1245916== by 0x10130D38: PetscInitialize (pinit.c:924) ==1245916== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1245916== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1245916== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1245916== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1245916== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1245916== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1245916== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1245916== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==1245916== ==1245916== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1245916== at 0xFBA382C: __open_nocancel (open64_nocancel.c:39) ==1245916== by 0xFB27BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1245916== by 0xF4D2822: ??? ==1245916== by 0xF4D296F: ??? ==1245916== by 0x14D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1245916== by 0x14D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1245916== by 0x14D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1245916== by 0x14CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1245916== by 0x114A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1245916== by 0x1143BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1245916== by 0x10130D38: PetscInitialize (pinit.c:924) ==1245916== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1245916== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1245916== by 0x11CA56: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1245916== by 0x118313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1245916== by 0x11A5FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1245916== by 0x11A4F9: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1245916== by 0x11AB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1245916== by 0x116B15: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==1245916== ==1245916== Open file descriptor 116: ==1245916== ==1245916== ==1245916== Open file descriptor 112: ==1245916== ==1245916== ==1245916== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==1245916== ==1245916== ==1245916== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1245916== ==1245916== ==1245916== ==1245916== HEAP SUMMARY: ==1245916== in use at exit: 835,564 bytes in 11,673 blocks ==1245916== total heap usage: 2,094,379 allocs, 2,082,706 frees, 1,876,918,770 bytes allocated ==1245916== ==1245916== LEAK SUMMARY: ==1245916== definitely lost: 0 bytes in 0 blocks ==1245916== indirectly lost: 0 bytes in 0 blocks ==1245916== possibly lost: 0 bytes in 0 blocks ==1245916== still reachable: 56 bytes in 3 blocks ==1245916== suppressed: 835,508 bytes in 11,670 blocks ==1245916== Reachable blocks (those to which a pointer was found) are not shown. ==1245916== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1245916== ==1245916== For lists of detected and suppressed errors, rerun with: -s ==1245916== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)