==1246019== Memcheck, a memory error detector ==1246019== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1246019== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1246019== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==1246019== Parent PID: 1230213 ==1246019== ==1246019== ==1246019== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1246019== Open file descriptor 12: ==1246019== at 0x1095FE8D: pipe (pipe.c:29) ==1246019== by 0x1B36B07D: ??? ==1246019== by 0x154C94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1246019== by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1246019== by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1246019== by 0xEEF8D38: PetscInitialize (pinit.c:924) ==1246019== by 0xED5F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1246019== by 0xED5F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1246019== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1246019== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1246019== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1246019== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1246019== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1246019== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1246019== ==1246019== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1246019== at 0x1096482C: __open_nocancel (open64_nocancel.c:39) ==1246019== by 0x108E8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1246019== by 0xED9A822: ??? ==1246019== by 0xED9A96F: ??? ==1246019== by 0x1556E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1246019== by 0x1556E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1246019== by 0x15524922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1246019== by 0x154C92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1246019== by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1246019== by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1246019== by 0xEEF8D38: PetscInitialize (pinit.c:924) ==1246019== by 0xED5F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1246019== by 0xED5F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1246019== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1246019== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1246019== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1246019== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1246019== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1246019== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1246019== ==1246019== Open file descriptor 116: ==1246019== ==1246019== ==1246019== Open file descriptor 112: ==1246019== ==1246019== ==1246019== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==1246019== ==1246019== ==1246019== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1246019== ==1246019== ==1246019== ==1246019== HEAP SUMMARY: ==1246019== in use at exit: 835,793 bytes in 11,679 blocks ==1246019== total heap usage: 271,467 allocs, 259,788 frees, 1,559,039,000 bytes allocated ==1246019== ==1246019== LEAK SUMMARY: ==1246019== definitely lost: 0 bytes in 0 blocks ==1246019== indirectly lost: 0 bytes in 0 blocks ==1246019== possibly lost: 0 bytes in 0 blocks ==1246019== still reachable: 200 bytes in 5 blocks ==1246019== suppressed: 835,593 bytes in 11,674 blocks ==1246019== Reachable blocks (those to which a pointer was found) are not shown. ==1246019== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1246019== ==1246019== For lists of detected and suppressed errors, rerun with: -s ==1246019== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)