==1422846== Memcheck, a memory error detector ==1422846== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1422846== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1422846== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestAlarcon2004OxygenBasedCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1422846== Parent PID: 1421288 ==1422846== ==1422846== ==1422846== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1422846== Open file descriptor 12: ==1422846== at 0xEF9DE8D: pipe (pipe.c:29) ==1422846== by 0x196AA07D: ??? ==1422846== by 0x13C5A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1422846== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1422846== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1422846== by 0xD87BD38: PetscInitialize (pinit.c:924) ==1422846== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1422846== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1422846== by 0x123229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1422846== by 0x11E723: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1422846== by 0x120D04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1422846== by 0x120C00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1422846== by 0x121213: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1422846== by 0x11CF25: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==1422846== ==1422846== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1422846== at 0xEFA282C: __open_nocancel (open64_nocancel.c:39) ==1422846== by 0xEF26BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1422846== by 0xD71D822: ??? ==1422846== by 0xD71D96F: ??? ==1422846== by 0x13CFF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1422846== by 0x13CFF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1422846== by 0x13CB5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1422846== by 0x13C5A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1422846== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1422846== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1422846== by 0xD87BD38: PetscInitialize (pinit.c:924) ==1422846== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1422846== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1422846== by 0x123229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1422846== by 0x11E723: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1422846== by 0x120D04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1422846== by 0x120C00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1422846== by 0x121213: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1422846== by 0x11CF25: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==1422846== ==1422846== Open file descriptor 116: ==1422846== ==1422846== ==1422846== Open file descriptor 112: ==1422846== ==1422846== ==1422846== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAlarcon2004OxygenBasedCellCycleOdeSystem_valgrind.txt ==1422846== ==1422846== ==1422846== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1422846== ==1422846== ==1422846== ==1422846== HEAP SUMMARY: ==1422846== in use at exit: 835,601 bytes in 11,676 blocks ==1422846== total heap usage: 174,489 allocs, 162,813 frees, 1,551,384,262 bytes allocated ==1422846== ==1422846== LEAK SUMMARY: ==1422846== definitely lost: 0 bytes in 0 blocks ==1422846== indirectly lost: 0 bytes in 0 blocks ==1422846== possibly lost: 0 bytes in 0 blocks ==1422846== still reachable: 24 bytes in 2 blocks ==1422846== suppressed: 835,577 bytes in 11,674 blocks ==1422846== Reachable blocks (those to which a pointer was found) are not shown. ==1422846== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1422846== ==1422846== For lists of detected and suppressed errors, rerun with: -s ==1422846== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)