==1436638== Memcheck, a memory error detector ==1436638== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1436638== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1436638== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==1436638== Parent PID: 1421288 ==1436638== ==1436638== ==1436638== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1436638== Open file descriptor 12: ==1436638== at 0x11024E8D: pipe (pipe.c:29) ==1436638== by 0x196AA07D: ??? ==1436638== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1436638== by 0x10846418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436638== by 0x107DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436638== by 0xF4D6D38: PetscInitialize (pinit.c:924) ==1436638== by 0xF33D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1436638== by 0xF33D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1436638== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1436638== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1436638== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1436638== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1436638== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1436638== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1436638== ==1436638== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1436638== at 0x1102982C: __open_nocancel (open64_nocancel.c:39) ==1436638== by 0x10FADBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1436638== by 0xF378822: ??? ==1436638== by 0xF37896F: ??? ==1436638== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1436638== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1436638== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1436638== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1436638== by 0x10846418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436638== by 0x107DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436638== by 0xF4D6D38: PetscInitialize (pinit.c:924) ==1436638== by 0xF33D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1436638== by 0xF33D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1436638== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1436638== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1436638== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1436638== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1436638== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1436638== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==1436638== ==1436638== Open file descriptor 116: ==1436638== ==1436638== ==1436638== Open file descriptor 112: ==1436638== ==1436638== ==1436638== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==1436638== ==1436638== ==1436638== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1436638== ==1436638== ==1436638== ==1436638== HEAP SUMMARY: ==1436638== in use at exit: 835,564 bytes in 11,673 blocks ==1436638== total heap usage: 3,827,177 allocs, 3,815,504 frees, 1,711,613,517 bytes allocated ==1436638== ==1436638== LEAK SUMMARY: ==1436638== definitely lost: 0 bytes in 0 blocks ==1436638== indirectly lost: 0 bytes in 0 blocks ==1436638== possibly lost: 0 bytes in 0 blocks ==1436638== still reachable: 56 bytes in 3 blocks ==1436638== suppressed: 835,508 bytes in 11,670 blocks ==1436638== Reachable blocks (those to which a pointer was found) are not shown. ==1436638== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1436638== ==1436638== For lists of detected and suppressed errors, rerun with: -s ==1436638== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)