==1437221== Memcheck, a memory error detector ==1437221== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1437221== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1437221== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1437221== Parent PID: 1421288 ==1437221== ==1437221== ==1437221== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1437221== Open file descriptor 12: ==1437221== at 0x111ECE8D: pipe (pipe.c:29) ==1437221== by 0x1B36B07D: ??? ==1437221== by 0x165854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1437221== by 0x12E49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437221== by 0x12DE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437221== by 0x11AD9D38: PetscInitialize (pinit.c:924) ==1437221== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1437221== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1437221== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1437221== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1437221== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1437221== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1437221== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1437221== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1437221== ==1437221== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1437221== at 0x111F182C: __open_nocancel (open64_nocancel.c:39) ==1437221== by 0x11175BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1437221== by 0x109F5822: ??? ==1437221== by 0x109F596F: ??? ==1437221== by 0x1662A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1437221== by 0x1662A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1437221== by 0x165E0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1437221== by 0x165852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1437221== by 0x12E49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437221== by 0x12DE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437221== by 0x11AD9D38: PetscInitialize (pinit.c:924) ==1437221== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1437221== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1437221== by 0x23B368: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1437221== by 0x231839: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1437221== by 0x235F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1437221== by 0x235E0A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1437221== by 0x2364A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1437221== by 0x22FC55: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==1437221== ==1437221== Open file descriptor 116: ==1437221== ==1437221== ==1437221== Open file descriptor 112: ==1437221== ==1437221== ==1437221== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==1437221== ==1437221== ==1437221== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1437221== ==1437221== ==1437221== ==1437221== HEAP SUMMARY: ==1437221== in use at exit: 835,580 bytes in 11,673 blocks ==1437221== total heap usage: 6,319,797 allocs, 6,308,124 frees, 2,259,510,590 bytes allocated ==1437221== ==1437221== LEAK SUMMARY: ==1437221== definitely lost: 0 bytes in 0 blocks ==1437221== indirectly lost: 0 bytes in 0 blocks ==1437221== possibly lost: 0 bytes in 0 blocks ==1437221== still reachable: 56 bytes in 3 blocks ==1437221== suppressed: 835,524 bytes in 11,670 blocks ==1437221== Reachable blocks (those to which a pointer was found) are not shown. ==1437221== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1437221== ==1437221== For lists of detected and suppressed errors, rerun with: -s ==1437221== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)