==1423097== Memcheck, a memory error detector ==1423097== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1423097== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1423097== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1423097== Parent PID: 1421288 ==1423097== ==1423097== ==1423097== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1423097== Open file descriptor 12: ==1423097== at 0xF8D4E8D: pipe (pipe.c:29) ==1423097== by 0x196AB07D: ??? ==1423097== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1423097== by 0x114A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423097== by 0x1143BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423097== by 0x10130D38: PetscInitialize (pinit.c:924) ==1423097== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1423097== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1423097== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1423097== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1423097== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1423097== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1423097== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1423097== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==1423097== ==1423097== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1423097== at 0xF8D982C: __open_nocancel (open64_nocancel.c:39) ==1423097== by 0xF85DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1423097== by 0xF1C4822: ??? ==1423097== by 0xF1C496F: ??? ==1423097== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1423097== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1423097== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1423097== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1423097== by 0x114A2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423097== by 0x1143BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423097== by 0x10130D38: PetscInitialize (pinit.c:924) ==1423097== by 0xF1892DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1423097== by 0xF18932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1423097== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1423097== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1423097== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1423097== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1423097== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1423097== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==1423097== ==1423097== Open file descriptor 116: ==1423097== ==1423097== ==1423097== Open file descriptor 112: ==1423097== ==1423097== ==1423097== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1423097== ==1423097== ==1423097== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1423097== ==1423097== ==1423097== ==1423097== HEAP SUMMARY: ==1423097== in use at exit: 835,564 bytes in 11,673 blocks ==1423097== total heap usage: 20,200,991 allocs, 20,189,318 frees, 2,764,699,323 bytes allocated ==1423097== ==1423097== LEAK SUMMARY: ==1423097== definitely lost: 0 bytes in 0 blocks ==1423097== indirectly lost: 0 bytes in 0 blocks ==1423097== possibly lost: 0 bytes in 0 blocks ==1423097== still reachable: 56 bytes in 3 blocks ==1423097== suppressed: 835,508 bytes in 11,670 blocks ==1423097== Reachable blocks (those to which a pointer was found) are not shown. ==1423097== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1423097== ==1423097== For lists of detected and suppressed errors, rerun with: -s ==1423097== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)