==1423503== Memcheck, a memory error detector ==1423503== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1423503== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1423503== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1423503== Parent PID: 1421288 ==1423503== ==1423503== ==1423503== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1423503== Open file descriptor 12: ==1423503== at 0xF92CE8D: pipe (pipe.c:29) ==1423503== by 0x196AB07D: ??? ==1423503== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1423503== by 0x11589418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423503== by 0x11522D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423503== by 0x10219D38: PetscInitialize (pinit.c:924) ==1423503== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1423503== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1423503== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1423503== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1423503== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1423503== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1423503== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1423503== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1423503== ==1423503== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1423503== at 0xF93182C: __open_nocancel (open64_nocancel.c:39) ==1423503== by 0xF8B5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1423503== by 0xF135822: ??? ==1423503== by 0xF13596F: ??? ==1423503== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1423503== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1423503== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1423503== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1423503== by 0x11589418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423503== by 0x11522D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1423503== by 0x10219D38: PetscInitialize (pinit.c:924) ==1423503== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1423503== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1423503== by 0x213670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1423503== by 0x20AE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1423503== by 0x20EA68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1423503== by 0x20E908: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1423503== by 0x20EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1423503== by 0x209235: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1423503== ==1423503== Open file descriptor 116: ==1423503== ==1423503== ==1423503== Open file descriptor 112: ==1423503== ==1423503== ==1423503== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==1423503== ==1423503== ==1423503== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1423503== ==1423503== ==1423503== ==1423503== HEAP SUMMARY: ==1423503== in use at exit: 835,596 bytes in 11,674 blocks ==1423503== total heap usage: 17,965,274 allocs, 17,953,600 frees, 30,277,379,399 bytes allocated ==1423503== ==1423503== LEAK SUMMARY: ==1423503== definitely lost: 0 bytes in 0 blocks ==1423503== indirectly lost: 0 bytes in 0 blocks ==1423503== possibly lost: 0 bytes in 0 blocks ==1423503== still reachable: 88 bytes in 4 blocks ==1423503== suppressed: 835,508 bytes in 11,670 blocks ==1423503== Reachable blocks (those to which a pointer was found) are not shown. ==1423503== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1423503== ==1423503== For lists of detected and suppressed errors, rerun with: -s ==1423503== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)