==1373987== Memcheck, a memory error detector ==1373987== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1373987== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1373987== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==1373987== Parent PID: 1372843 ==1373987== ==1373987== ==1373987== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1373987== Open file descriptor 12: ==1373987== at 0xE40A26D: pipe (pipe.c:29) ==1373987== by 0x18ADF07D: ??? ==1373987== by 0x12C244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373987== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373987== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373987== by 0xCCC6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1373987== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373987== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373987== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1373987== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373987== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373987== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373987== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373987== by 0x1222F5: main (TestCell.cpp:19) ==1373987== ==1373987== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1373987== at 0xE40EC0C: __open_nocancel (open64_nocancel.c:39) ==1373987== by 0xE392BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1373987== by 0xDF50822: ??? ==1373987== by 0xDF5096F: ??? ==1373987== by 0x12CC96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373987== by 0x12CC9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373987== by 0x12C7F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373987== by 0x12C242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373987== by 0xE059418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373987== by 0xDFF2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373987== by 0xCCC6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1373987== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373987== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373987== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1373987== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373987== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373987== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373987== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373987== by 0x1222F5: main (TestCell.cpp:19) ==1373987== ==1373987== Open file descriptor 119: ==1373987== ==1373987== ==1373987== Open file descriptor 115: ==1373987== ==1373987== ==1373987== Open file descriptor 114: /etc/ssl/certs/ca-certificates.crt ==1373987== ==1373987== ==1373987== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==1373987== ==1373987== ==1373987== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1373987== ==1373987== ==1373987== ==1373987== HEAP SUMMARY: ==1373987== in use at exit: 858,089 bytes in 12,110 blocks ==1373987== total heap usage: 5,191,462 allocs, 5,179,352 frees, 2,023,602,194 bytes allocated ==1373987== ==1373987== LEAK SUMMARY: ==1373987== definitely lost: 0 bytes in 0 blocks ==1373987== indirectly lost: 0 bytes in 0 blocks ==1373987== possibly lost: 0 bytes in 0 blocks ==1373987== still reachable: 184 bytes in 4 blocks ==1373987== suppressed: 857,905 bytes in 12,106 blocks ==1373987== Reachable blocks (those to which a pointer was found) are not shown. ==1373987== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1373987== ==1373987== For lists of detected and suppressed errors, rerun with: -s ==1373987== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)