==1373479== Memcheck, a memory error detector ==1373479== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1373479== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1373479== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestMutableVertexMeshReMesh -malloc_debug -malloc_dump -memory_info ==1373479== Parent PID: 1372843 ==1373479== ==1373479== ==1373479== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1373479== Open file descriptor 12: ==1373479== at 0x7A7326D: pipe (pipe.c:29) ==1373479== by 0xFDFA07D: ??? ==1373479== by 0xB7224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373479== by 0x76C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373479== by 0x765BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373479== by 0x6352D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1373479== by 0x61C3153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373479== by 0x61C31A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373479== by 0x1B0B63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1373479== by 0x1A87BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373479== by 0x1AC5E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373479== by 0x1AC480: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373479== by 0x1ACB17: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373479== by 0x1A6BE5: main (TestMutableVertexMeshReMesh.cpp:19) ==1373479== ==1373479== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1373479== at 0x7A77C0C: __open_nocancel (open64_nocancel.c:39) ==1373479== by 0x79FBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1373479== by 0x61F7822: ??? ==1373479== by 0x61F796F: ??? ==1373479== by 0xB7C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373479== by 0xB7C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373479== by 0xB77D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373479== by 0xB7222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373479== by 0x76C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373479== by 0x765BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373479== by 0x6352D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1373479== by 0x61C3153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373479== by 0x61C31A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373479== by 0x1B0B63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1373479== by 0x1A87BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373479== by 0x1AC5E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373479== by 0x1AC480: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373479== by 0x1ACB17: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373479== by 0x1A6BE5: main (TestMutableVertexMeshReMesh.cpp:19) ==1373479== ==1373479== Open file descriptor 119: ==1373479== ==1373479== ==1373479== Open file descriptor 115: ==1373479== ==1373479== ==1373479== Open file descriptor 114: /etc/ssl/certs/ca-certificates.crt ==1373479== ==1373479== ==1373479== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshReMesh_valgrind.txt ==1373479== ==1373479== ==1373479== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1373479== ==1373479== ==1373479== ==1373479== HEAP SUMMARY: ==1373479== in use at exit: 860,448 bytes in 12,113 blocks ==1373479== total heap usage: 90,138 allocs, 78,025 frees, 1,544,466,318 bytes allocated ==1373479== ==1373479== LEAK SUMMARY: ==1373479== definitely lost: 0 bytes in 0 blocks ==1373479== indirectly lost: 0 bytes in 0 blocks ==1373479== possibly lost: 0 bytes in 0 blocks ==1373479== still reachable: 2,576 bytes in 3 blocks ==1373479== suppressed: 857,872 bytes in 12,110 blocks ==1373479== Reachable blocks (those to which a pointer was found) are not shown. ==1373479== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1373479== ==1373479== For lists of detected and suppressed errors, rerun with: -s ==1373479== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 20 from 20)