==1374619== Memcheck, a memory error detector ==1374619== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1374619== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1374619== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==1374619== Parent PID: 1372843 ==1374619== ==1374619== ==1374619== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1374619== Open file descriptor 12: ==1374619== at 0xE90526D: pipe (pipe.c:29) ==1374619== by 0x18ADF07D: ??? ==1374619== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1374619== by 0x105A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374619== by 0x1053DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374619== by 0xF234D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1374619== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1374619== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1374619== by 0x13A5A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1374619== by 0x13500D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1374619== by 0x137D30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1374619== by 0x137BD0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1374619== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1374619== by 0x133435: main (TestNumericalMethods.cpp:19) ==1374619== ==1374619== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1374619== at 0xE909C0C: __open_nocancel (open64_nocancel.c:39) ==1374619== by 0xE88DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1374619== by 0xE49B822: ??? ==1374619== by 0xE49B96F: ??? ==1374619== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374619== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374619== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374619== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1374619== by 0x105A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374619== by 0x1053DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374619== by 0xF234D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1374619== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1374619== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1374619== by 0x13A5A4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1374619== by 0x13500D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1374619== by 0x137D30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1374619== by 0x137BD0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1374619== by 0x138267: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1374619== by 0x133435: main (TestNumericalMethods.cpp:19) ==1374619== ==1374619== Open file descriptor 119: ==1374619== ==1374619== ==1374619== Open file descriptor 115: ==1374619== ==1374619== ==1374619== Open file descriptor 114: /etc/ssl/certs/ca-certificates.crt ==1374619== ==1374619== ==1374619== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==1374619== ==1374619== ==1374619== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1374619== ==1374619== ==1374619== ==1374619== HEAP SUMMARY: ==1374619== in use at exit: 858,024 bytes in 12,113 blocks ==1374619== total heap usage: 77,294 allocs, 65,181 frees, 1,546,279,585 bytes allocated ==1374619== ==1374619== LEAK SUMMARY: ==1374619== definitely lost: 0 bytes in 0 blocks ==1374619== indirectly lost: 0 bytes in 0 blocks ==1374619== possibly lost: 0 bytes in 0 blocks ==1374619== still reachable: 56 bytes in 3 blocks ==1374619== suppressed: 857,968 bytes in 12,110 blocks ==1374619== Reachable blocks (those to which a pointer was found) are not shown. ==1374619== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1374619== ==1374619== For lists of detected and suppressed errors, rerun with: -s ==1374619== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)