==1381537== Memcheck, a memory error detector ==1381537== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1381537== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1381537== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDifferentialAdhesionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1381537== Parent PID: 1372843 ==1381537== ==1381537== ==1381537== FILE DESCRIPTORS: 10 open (3 std) at exit. ==1381537== Open file descriptor 12: ==1381537== at 0xFCD326D: pipe (pipe.c:29) ==1381537== by 0x18ADF07D: ??? ==1381537== by 0x140294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1381537== by 0xF922418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1381537== by 0xF8BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1381537== by 0xE58FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1381537== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1381537== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1381537== by 0x123C7F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1381537== by 0x11F653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1381537== by 0x121858: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1381537== by 0x121754: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1381537== by 0x121D67: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1381537== by 0x11DE55: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==1381537== ==1381537== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1381537== at 0xFCD7C0C: __open_nocancel (open64_nocancel.c:39) ==1381537== by 0xFC5BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1381537== by 0xF819822: ??? ==1381537== by 0xF81996F: ??? ==1381537== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1381537== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1381537== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1381537== by 0x140292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1381537== by 0xF922418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1381537== by 0xF8BBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1381537== by 0xE58FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1381537== by 0xE467153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1381537== by 0xE4671A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1381537== by 0x123C7F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1381537== by 0x11F653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1381537== by 0x121858: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1381537== by 0x121754: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1381537== by 0x121D67: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1381537== by 0x11DE55: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==1381537== ==1381537== Open file descriptor 119: ==1381537== ==1381537== ==1381537== Open file descriptor 115: ==1381537== ==1381537== ==1381537== Open file descriptor 114: /etc/ssl/certs/ca-certificates.crt ==1381537== ==1381537== ==1381537== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDifferentialAdhesionSimulationsTutorial_valgrind.txt ==1381537== ==1381537== ==1381537== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1381537== ==1381537== ==1381537== ==1381537== HEAP SUMMARY: ==1381537== in use at exit: 857,977 bytes in 12,110 blocks ==1381537== total heap usage: 2,502,675 allocs, 2,490,565 frees, 1,664,985,103 bytes allocated ==1381537== ==1381537== LEAK SUMMARY: ==1381537== definitely lost: 0 bytes in 0 blocks ==1381537== indirectly lost: 0 bytes in 0 blocks ==1381537== possibly lost: 0 bytes in 0 blocks ==1381537== still reachable: 72 bytes in 4 blocks ==1381537== suppressed: 857,905 bytes in 12,106 blocks ==1381537== Reachable blocks (those to which a pointer was found) are not shown. ==1381537== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1381537== ==1381537== For lists of detected and suppressed errors, rerun with: -s ==1381537== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)