==1539555== Memcheck, a memory error detector ==1539555== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1539555== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1539555== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==1539555== Parent PID: 1523326 ==1539555== ==1539555== ==1539555== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1539555== Open file descriptor 12: ==1539555== at 0x6BDAE8D: pipe (pipe.c:29) ==1539555== by 0x1041007D: ??? ==1539555== by 0xB7404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1539555== by 0x5EE0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539555== by 0x5E79D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539555== by 0x4B42D38: PetscInitialize (pinit.c:924) ==1539555== by 0x4A18153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1539555== by 0x4A181A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1539555== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1539555== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1539555== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1539555== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1539555== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1539555== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==1539555== ==1539555== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1539555== at 0x6BDF82C: __open_nocancel (open64_nocancel.c:39) ==1539555== by 0x6B63BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1539555== by 0x5DD2822: ??? ==1539555== by 0x5DD296F: ??? ==1539555== by 0xB7E56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1539555== by 0xB7E5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1539555== by 0xB79B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1539555== by 0xB7402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1539555== by 0x5EE0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539555== by 0x5E79D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539555== by 0x4B42D38: PetscInitialize (pinit.c:924) ==1539555== by 0x4A18153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1539555== by 0x4A181A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1539555== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1539555== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1539555== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1539555== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1539555== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1539555== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==1539555== ==1539555== Open file descriptor 116: ==1539555== ==1539555== ==1539555== Open file descriptor 112: ==1539555== ==1539555== ==1539555== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==1539555== ==1539555== ==1539555== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1539555== ==1539555== ==1539555== ==1539555== HEAP SUMMARY: ==1539555== in use at exit: 835,601 bytes in 11,676 blocks ==1539555== total heap usage: 635,466 allocs, 623,790 frees, 1,988,787,016 bytes allocated ==1539555== ==1539555== LEAK SUMMARY: ==1539555== definitely lost: 0 bytes in 0 blocks ==1539555== indirectly lost: 0 bytes in 0 blocks ==1539555== possibly lost: 0 bytes in 0 blocks ==1539555== still reachable: 24 bytes in 2 blocks ==1539555== suppressed: 835,577 bytes in 11,674 blocks ==1539555== Reachable blocks (those to which a pointer was found) are not shown. ==1539555== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1539555== ==1539555== For lists of detected and suppressed errors, rerun with: -s ==1539555== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)