==1539723== Memcheck, a memory error detector ==1539723== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1539723== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1539723== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==1539723== Parent PID: 1523326 ==1539723== ==1539723== ==1539723== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1539723== Open file descriptor 12: ==1539723== at 0xBD62E8D: pipe (pipe.c:29) ==1539723== by 0x13F9307D: ??? ==1539723== by 0xF7634CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1539723== by 0xB651418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539723== by 0xB5EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539723== by 0xA2E1D38: PetscInitialize (pinit.c:924) ==1539723== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1539723== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1539723== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1539723== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1539723== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1539723== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1539723== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1539723== by 0x138285: main (TestBidomainProblem.cpp:19) ==1539723== ==1539723== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1539723== at 0xBD6782C: __open_nocancel (open64_nocancel.c:39) ==1539723== by 0xBCEBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1539723== by 0xA181822: ??? ==1539723== by 0xA18196F: ??? ==1539723== by 0xF8086DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1539723== by 0xF808938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1539723== by 0xF7BE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1539723== by 0xF7632DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1539723== by 0xB651418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539723== by 0xB5EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1539723== by 0xA2E1D38: PetscInitialize (pinit.c:924) ==1539723== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1539723== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1539723== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1539723== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1539723== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1539723== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1539723== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1539723== by 0x138285: main (TestBidomainProblem.cpp:19) ==1539723== ==1539723== Open file descriptor 116: ==1539723== ==1539723== ==1539723== Open file descriptor 112: ==1539723== ==1539723== ==1539723== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==1539723== ==1539723== ==1539723== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1539723== ==1539723== ==1539723== ==1539723== HEAP SUMMARY: ==1539723== in use at exit: 836,097 bytes in 11,686 blocks ==1539723== total heap usage: 594,880 allocs, 583,194 frees, 1,751,413,403 bytes allocated ==1539723== ==1539723== LEAK SUMMARY: ==1539723== definitely lost: 0 bytes in 0 blocks ==1539723== indirectly lost: 0 bytes in 0 blocks ==1539723== possibly lost: 0 bytes in 0 blocks ==1539723== still reachable: 24 bytes in 2 blocks ==1539723== suppressed: 836,073 bytes in 11,684 blocks ==1539723== Reachable blocks (those to which a pointer was found) are not shown. ==1539723== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1539723== ==1539723== For lists of detected and suppressed errors, rerun with: -s ==1539723== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)