==1524479== Memcheck, a memory error detector ==1524479== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1524479== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1524479== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==1524479== Parent PID: 1523326 ==1524479== ==1524479== ==1524479== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1524479== Open file descriptor 12: ==1524479== at 0xE418E8D: pipe (pipe.c:29) ==1524479== by 0x18A1C07D: ??? ==1524479== by 0x12F794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1524479== by 0xE068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1524479== by 0xE001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1524479== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==1524479== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1524479== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1524479== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1524479== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1524479== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1524479== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1524479== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1524479== by 0x113935: main (TestCellSrn.cpp:18) ==1524479== ==1524479== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1524479== at 0xE41D82C: __open_nocancel (open64_nocancel.c:39) ==1524479== by 0xE3A1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1524479== by 0xDF5A822: ??? ==1524479== by 0xDF5A96F: ??? ==1524479== by 0x1301E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1524479== by 0x1301E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1524479== by 0x12FD4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1524479== by 0x12F792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1524479== by 0xE068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1524479== by 0xE001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1524479== by 0xCCCAD38: PetscInitialize (pinit.c:924) ==1524479== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1524479== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1524479== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1524479== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1524479== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1524479== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1524479== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1524479== by 0x113935: main (TestCellSrn.cpp:18) ==1524479== ==1524479== Open file descriptor 116: ==1524479== ==1524479== ==1524479== Open file descriptor 112: ==1524479== ==1524479== ==1524479== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==1524479== ==1524479== ==1524479== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1524479== ==1524479== ==1524479== ==1524479== HEAP SUMMARY: ==1524479== in use at exit: 835,697 bytes in 11,678 blocks ==1524479== total heap usage: 71,190 allocs, 59,512 frees, 1,541,084,812 bytes allocated ==1524479== ==1524479== LEAK SUMMARY: ==1524479== definitely lost: 0 bytes in 0 blocks ==1524479== indirectly lost: 0 bytes in 0 blocks ==1524479== possibly lost: 0 bytes in 0 blocks ==1524479== still reachable: 120 bytes in 4 blocks ==1524479== suppressed: 835,577 bytes in 11,674 blocks ==1524479== Reachable blocks (those to which a pointer was found) are not shown. ==1524479== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1524479== ==1524479== For lists of detected and suppressed errors, rerun with: -s ==1524479== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)