==1523329== Memcheck, a memory error detector ==1523329== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1523329== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1523329== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==1523329== Parent PID: 1523326 ==1523329== ==1523329== ==1523329== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1523329== Open file descriptor 12: ==1523329== at 0x4CBBE8D: pipe (pipe.c:29) ==1523329== by 0xAEA307D: ??? ==1523329== by 0x89C54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1523329== by 0x6278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1523329== by 0x6211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1523329== by 0x4F08D38: PetscInitialize (pinit.c:924) ==1523329== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1523329== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1523329== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==1523329== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==1523329== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==1523329== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==1523329== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==1523329== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==1523329== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1523329== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1523329== by 0x110C15: main (TestCitations.cpp:18) ==1523329== ==1523329== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1523329== at 0x4CC082C: __open_nocancel (open64_nocancel.c:39) ==1523329== by 0x4C44BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1523329== by 0x4934822: ??? ==1523329== by 0x493496F: ??? ==1523329== by 0x8A6A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1523329== by 0x8A6A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1523329== by 0x8A20922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1523329== by 0x89C52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1523329== by 0x6278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1523329== by 0x6211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1523329== by 0x4F08D38: PetscInitialize (pinit.c:924) ==1523329== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1523329== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1523329== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==1523329== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==1523329== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==1523329== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==1523329== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==1523329== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==1523329== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1523329== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1523329== by 0x110C15: main (TestCitations.cpp:18) ==1523329== ==1523329== Open file descriptor 116: ==1523329== ==1523329== ==1523329== Open file descriptor 112: ==1523329== ==1523329== ==1523329== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==1523329== ==1523329== ==1523329== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1523329== ==1523329== ==1523329== ==1523329== HEAP SUMMARY: ==1523329== in use at exit: 835,137 bytes in 11,676 blocks ==1523329== total heap usage: 53,606 allocs, 41,930 frees, 1,540,068,882 bytes allocated ==1523329== ==1523329== LEAK SUMMARY: ==1523329== definitely lost: 0 bytes in 0 blocks ==1523329== indirectly lost: 0 bytes in 0 blocks ==1523329== possibly lost: 0 bytes in 0 blocks ==1523329== still reachable: 24 bytes in 2 blocks ==1523329== suppressed: 835,113 bytes in 11,674 blocks ==1523329== Reachable blocks (those to which a pointer was found) are not shown. ==1523329== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1523329== ==1523329== For lists of detected and suppressed errors, rerun with: -s ==1523329== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)