==1535339== Memcheck, a memory error detector ==1535339== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1535339== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1535339== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==1535339== Parent PID: 1523326 ==1535339== ==1535339== ==1535339== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1535339== Open file descriptor 12: ==1535339== at 0x1006AE8D: pipe (pipe.c:29) ==1535339== by 0x18A1A07D: ??? ==1535339== by 0x13F8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1535339== by 0xF973418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1535339== by 0xF90CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1535339== by 0xE603D38: PetscInitialize (pinit.c:924) ==1535339== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1535339== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1535339== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1535339== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1535339== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1535339== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1535339== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1535339== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==1535339== ==1535339== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1535339== at 0x1006F82C: __open_nocancel (open64_nocancel.c:39) ==1535339== by 0xFFF3BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1535339== by 0xE4A5822: ??? ==1535339== by 0xE4A596F: ??? ==1535339== by 0x140306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1535339== by 0x14030938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1535339== by 0x13FE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1535339== by 0x13F8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1535339== by 0xF973418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1535339== by 0xF90CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1535339== by 0xE603D38: PetscInitialize (pinit.c:924) ==1535339== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1535339== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1535339== by 0x13161D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1535339== by 0x12C98F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1535339== by 0x12EEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1535339== by 0x12EDDB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1535339== by 0x12F3EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1535339== by 0x12B185: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==1535339== ==1535339== Open file descriptor 116: ==1535339== ==1535339== ==1535339== Open file descriptor 112: ==1535339== ==1535339== ==1535339== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==1535339== ==1535339== ==1535339== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1535339== ==1535339== ==1535339== ==1535339== HEAP SUMMARY: ==1535339== in use at exit: 835,633 bytes in 11,677 blocks ==1535339== total heap usage: 524,569 allocs, 512,892 frees, 1,854,049,735 bytes allocated ==1535339== ==1535339== LEAK SUMMARY: ==1535339== definitely lost: 0 bytes in 0 blocks ==1535339== indirectly lost: 0 bytes in 0 blocks ==1535339== possibly lost: 0 bytes in 0 blocks ==1535339== still reachable: 56 bytes in 3 blocks ==1535339== suppressed: 835,577 bytes in 11,674 blocks ==1535339== Reachable blocks (those to which a pointer was found) are not shown. ==1535339== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1535339== ==1535339== For lists of detected and suppressed errors, rerun with: -s ==1535339== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)