==1526092== Memcheck, a memory error detector ==1526092== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1526092== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1526092== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1526092== Parent PID: 1523326 ==1526092== ==1526092== ==1526092== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1526092== Open file descriptor 12: ==1526092== at 0xEFF7E8D: pipe (pipe.c:29) ==1526092== by 0x18A1A07D: ??? ==1526092== by 0x1402B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1526092== by 0x108F9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1526092== by 0x10892D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1526092== by 0xF589D38: PetscInitialize (pinit.c:924) ==1526092== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1526092== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1526092== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1526092== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1526092== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1526092== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1526092== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1526092== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1526092== ==1526092== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1526092== at 0xEFFC82C: __open_nocancel (open64_nocancel.c:39) ==1526092== by 0xEF80BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1526092== by 0xE842822: ??? ==1526092== by 0xE84296F: ??? ==1526092== by 0x140D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1526092== by 0x140D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1526092== by 0x14086922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1526092== by 0x1402B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1526092== by 0x108F9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1526092== by 0x10892D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1526092== by 0xF589D38: PetscInitialize (pinit.c:924) ==1526092== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1526092== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1526092== by 0x135832: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1526092== by 0x1303C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1526092== by 0x133048: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1526092== by 0x132EE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1526092== by 0x13357F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1526092== by 0x12E7B5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1526092== ==1526092== Open file descriptor 116: ==1526092== ==1526092== ==1526092== Open file descriptor 112: ==1526092== ==1526092== ==1526092== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1526092== ==1526092== ==1526092== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1526092== ==1526092== ==1526092== ==1526092== HEAP SUMMARY: ==1526092== in use at exit: 835,564 bytes in 11,673 blocks ==1526092== total heap usage: 2,364,663 allocs, 2,352,990 frees, 1,978,045,666 bytes allocated ==1526092== ==1526092== LEAK SUMMARY: ==1526092== definitely lost: 0 bytes in 0 blocks ==1526092== indirectly lost: 0 bytes in 0 blocks ==1526092== possibly lost: 0 bytes in 0 blocks ==1526092== still reachable: 56 bytes in 3 blocks ==1526092== suppressed: 835,508 bytes in 11,670 blocks ==1526092== Reachable blocks (those to which a pointer was found) are not shown. ==1526092== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1526092== ==1526092== For lists of detected and suppressed errors, rerun with: -s ==1526092== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)