==1396892== Memcheck, a memory error detector ==1396892== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1396892== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1396892== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==1396892== Parent PID: 1395708 ==1396892== ==1396892== ==1396892== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1396892== Open file descriptor 12: ==1396892== at 0xE69126D: pipe (pipe.c:29) ==1396892== by 0x18ADF07D: ??? ==1396892== by 0x12C754CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1396892== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396892== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396892== by 0xCF6ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1396892== by 0xCDE1153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1396892== by 0xCDE11A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1396892== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1396892== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1396892== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1396892== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1396892== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1396892== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1396892== ==1396892== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1396892== at 0xE695C0C: __open_nocancel (open64_nocancel.c:39) ==1396892== by 0xE619BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1396892== by 0xCE15822: ??? ==1396892== by 0xCE1596F: ??? ==1396892== by 0x12D1A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396892== by 0x12D1A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396892== by 0x12CD0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1396892== by 0x12C752DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1396892== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396892== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1396892== by 0xCF6ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1396892== by 0xCDE1153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1396892== by 0xCDE11A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1396892== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1396892== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1396892== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1396892== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1396892== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1396892== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1396892== ==1396892== Open file descriptor 117: ==1396892== ==1396892== ==1396892== Open file descriptor 113: ==1396892== ==1396892== ==1396892== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==1396892== ==1396892== ==1396892== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1396892== ==1396892== ==1396892== ==1396892== HEAP SUMMARY: ==1396892== in use at exit: 857,977 bytes in 12,110 blocks ==1396892== total heap usage: 4,187,412 allocs, 4,175,302 frees, 1,974,497,259 bytes allocated ==1396892== ==1396892== LEAK SUMMARY: ==1396892== definitely lost: 0 bytes in 0 blocks ==1396892== indirectly lost: 0 bytes in 0 blocks ==1396892== possibly lost: 0 bytes in 0 blocks ==1396892== still reachable: 72 bytes in 4 blocks ==1396892== suppressed: 857,905 bytes in 12,106 blocks ==1396892== Reachable blocks (those to which a pointer was found) are not shown. ==1396892== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1396892== ==1396892== For lists of detected and suppressed errors, rerun with: -s ==1396892== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)