==1661143== Memcheck, a memory error detector ==1661143== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1661143== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1661143== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==1661143== Parent PID: 1659979 ==1661143== ==1661143== ==1661143== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1661143== Open file descriptor 12: ==1661143== at 0xE6A007D: pipe (pipe.c:29) ==1661143== by 0x18A1B07D: ??? ==1661143== by 0x12FCB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1661143== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1661143== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1661143== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1661143== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1661143== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1661143== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1661143== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1661143== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1661143== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1661143== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1661143== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==1661143== ==1661143== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1661143== at 0xE6A4A1C: __open_nocancel (open64_nocancel.c:39) ==1661143== by 0xE628BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1661143== by 0xCE1F822: ??? ==1661143== by 0xCE1F96F: ??? ==1661143== by 0x130706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1661143== by 0x13070938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1661143== by 0x13026922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1661143== by 0x12FCB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1661143== by 0xE2ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1661143== by 0xE286D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1661143== by 0xCF7DD38: PetscInitialize (pinit.c:924) ==1661143== by 0xCDE5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1661143== by 0xCDE51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1661143== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1661143== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1661143== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1661143== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1661143== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1661143== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==1661143== ==1661143== Open file descriptor 116: ==1661143== ==1661143== ==1661143== Open file descriptor 112: ==1661143== ==1661143== ==1661143== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==1661143== ==1661143== ==1661143== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1661143== ==1661143== ==1661143== ==1661143== HEAP SUMMARY: ==1661143== in use at exit: 835,633 bytes in 11,677 blocks ==1661143== total heap usage: 555,241 allocs, 543,564 frees, 1,546,455,011 bytes allocated ==1661143== ==1661143== LEAK SUMMARY: ==1661143== definitely lost: 0 bytes in 0 blocks ==1661143== indirectly lost: 0 bytes in 0 blocks ==1661143== possibly lost: 0 bytes in 0 blocks ==1661143== still reachable: 56 bytes in 3 blocks ==1661143== suppressed: 835,577 bytes in 11,674 blocks ==1661143== Reachable blocks (those to which a pointer was found) are not shown. ==1661143== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1661143== ==1661143== For lists of detected and suppressed errors, rerun with: -s ==1661143== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)