==1481596== Memcheck, a memory error detector ==1481596== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1481596== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1481596== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1481596== Parent PID: 1480089 ==1481596== ==1481596== ==1481596== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1481596== Open file descriptor 12: ==1481596== at 0xCF9726D: pipe (pipe.c:29) ==1481596== by 0x18AE407D: ??? ==1481596== by 0x140814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1481596== by 0x104C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481596== by 0x1045BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481596== by 0xF150D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1481596== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1481596== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1481596== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1481596== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1481596== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1481596== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1481596== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1481596== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==1481596== ==1481596== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1481596== at 0xCF9BC0C: __open_nocancel (open64_nocancel.c:39) ==1481596== by 0xCF1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1481596== by 0xCBD0822: ??? ==1481596== by 0xCBD096F: ??? ==1481596== by 0x141266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481596== by 0x14126938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481596== by 0x140DC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481596== by 0x140812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1481596== by 0x104C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481596== by 0x1045BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481596== by 0xF150D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1481596== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1481596== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1481596== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1481596== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1481596== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1481596== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1481596== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1481596== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==1481596== ==1481596== Open file descriptor 117: ==1481596== ==1481596== ==1481596== Open file descriptor 113: ==1481596== ==1481596== ==1481596== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1481596== ==1481596== ==1481596== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1481596== ==1481596== ==1481596== ==1481596== HEAP SUMMARY: ==1481596== in use at exit: 858,024 bytes in 12,113 blocks ==1481596== total heap usage: 63,843 allocs, 51,730 frees, 1,543,604,255 bytes allocated ==1481596== ==1481596== LEAK SUMMARY: ==1481596== definitely lost: 0 bytes in 0 blocks ==1481596== indirectly lost: 0 bytes in 0 blocks ==1481596== possibly lost: 0 bytes in 0 blocks ==1481596== still reachable: 56 bytes in 3 blocks ==1481596== suppressed: 857,968 bytes in 12,110 blocks ==1481596== Reachable blocks (those to which a pointer was found) are not shown. ==1481596== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1481596== ==1481596== For lists of detected and suppressed errors, rerun with: -s ==1481596== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)