==1491222== Memcheck, a memory error detector ==1491222== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1491222== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1491222== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==1491222== Parent PID: 1480089 ==1491222== ==1491222== ==1491222== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1491222== Open file descriptor 12: ==1491222== at 0x85DF26D: pipe (pipe.c:29) ==1491222== by 0x1406007D: ??? ==1491222== by 0xE74B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1491222== by 0x9CD9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491222== by 0x9C72D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491222== by 0x8969D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1491222== by 0x820E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1491222== by 0x820E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1491222== by 0x120214: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1491222== by 0x11A94D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1491222== by 0x11E098: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1491222== by 0x11DF38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1491222== by 0x11E5CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1491222== by 0x118D75: main (TestCardiacSimulation.cpp:19) ==1491222== ==1491222== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1491222== at 0x85E3C0C: __open_nocancel (open64_nocancel.c:39) ==1491222== by 0x8567BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1491222== by 0x8242822: ??? ==1491222== by 0x824296F: ??? ==1491222== by 0xE7F26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491222== by 0xE7F2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491222== by 0xE7A8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491222== by 0xE74B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1491222== by 0x9CD9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491222== by 0x9C72D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491222== by 0x8969D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1491222== by 0x820E153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1491222== by 0x820E1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1491222== by 0x120214: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1491222== by 0x11A94D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1491222== by 0x11E098: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1491222== by 0x11DF38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1491222== by 0x11E5CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1491222== by 0x118D75: main (TestCardiacSimulation.cpp:19) ==1491222== ==1491222== Open file descriptor 117: ==1491222== ==1491222== ==1491222== Open file descriptor 113: ==1491222== ==1491222== ==1491222== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==1491222== ==1491222== ==1491222== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1491222== ==1491222== ==1491222== ==1491222== HEAP SUMMARY: ==1491222== in use at exit: 865,701 bytes in 12,134 blocks ==1491222== total heap usage: 4,773,538 allocs, 4,761,404 frees, 3,041,681,856 bytes allocated ==1491222== ==1491222== LEAK SUMMARY: ==1491222== definitely lost: 0 bytes in 0 blocks ==1491222== indirectly lost: 0 bytes in 0 blocks ==1491222== possibly lost: 0 bytes in 0 blocks ==1491222== still reachable: 7,300 bytes in 18 blocks ==1491222== suppressed: 858,401 bytes in 12,116 blocks ==1491222== Reachable blocks (those to which a pointer was found) are not shown. ==1491222== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1491222== ==1491222== For lists of detected and suppressed errors, rerun with: -s ==1491222== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 217 from 20)