==1481672== Memcheck, a memory error detector ==1481672== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1481672== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1481672== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==1481672== Parent PID: 1480089 ==1481672== ==1481672== ==1481672== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1481672== Open file descriptor 12: ==1481672== at 0xE82326D: pipe (pipe.c:29) ==1481672== by 0x18AE507D: ??? ==1481672== by 0x140824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1481672== by 0x104C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481672== by 0x10459D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481672== by 0xF150D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1481672== by 0xE46C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1481672== by 0xE46C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1481672== by 0x11DCAE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1481672== by 0x119453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1481672== by 0x11B7C8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1481672== by 0x11B6C3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1481672== by 0x11BCD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1481672== by 0x117C55: main (TestCellwiseDataGradient.cpp:18) ==1481672== ==1481672== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1481672== at 0xE827C0C: __open_nocancel (open64_nocancel.c:39) ==1481672== by 0xE7ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1481672== by 0xE4A0822: ??? ==1481672== by 0xE4A096F: ??? ==1481672== by 0x141276DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481672== by 0x14127938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481672== by 0x140DD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481672== by 0x140822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1481672== by 0x104C0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481672== by 0x10459D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481672== by 0xF150D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1481672== by 0xE46C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1481672== by 0xE46C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1481672== by 0x11DCAE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1481672== by 0x119453: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1481672== by 0x11B7C8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1481672== by 0x11B6C3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1481672== by 0x11BCD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1481672== by 0x117C55: main (TestCellwiseDataGradient.cpp:18) ==1481672== ==1481672== Open file descriptor 117: ==1481672== ==1481672== ==1481672== Open file descriptor 113: ==1481672== ==1481672== ==1481672== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==1481672== ==1481672== ==1481672== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1481672== ==1481672== ==1481672== ==1481672== HEAP SUMMARY: ==1481672== in use at exit: 858,024 bytes in 12,113 blocks ==1481672== total heap usage: 426,962 allocs, 414,849 frees, 1,558,078,440 bytes allocated ==1481672== ==1481672== LEAK SUMMARY: ==1481672== definitely lost: 0 bytes in 0 blocks ==1481672== indirectly lost: 0 bytes in 0 blocks ==1481672== possibly lost: 0 bytes in 0 blocks ==1481672== still reachable: 56 bytes in 3 blocks ==1481672== suppressed: 857,968 bytes in 12,110 blocks ==1481672== Reachable blocks (those to which a pointer was found) are not shown. ==1481672== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1481672== ==1481672== For lists of detected and suppressed errors, rerun with: -s ==1481672== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)