==1491242== Memcheck, a memory error detector ==1491242== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1491242== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1491242== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==1491242== Parent PID: 1480089 ==1491242== ==1491242== ==1491242== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1491242== Open file descriptor 12: ==1491242== at 0xA0F226D: pipe (pipe.c:29) ==1491242== by 0x1405F07D: ??? ==1491242== by 0xF8054CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1491242== by 0xB7EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491242== by 0xB783D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491242== by 0xA47AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1491242== by 0x9D1F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1491242== by 0x9D1F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1491242== by 0x123956: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1491242== by 0x11E4B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1491242== by 0x120CD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1491242== by 0x120BCB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1491242== by 0x1211DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1491242== by 0x11CCB5: main (TestCheckpointing.cpp:18) ==1491242== ==1491242== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1491242== at 0xA0F6C0C: __open_nocancel (open64_nocancel.c:39) ==1491242== by 0xA07ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1491242== by 0x9D53822: ??? ==1491242== by 0x9D5396F: ??? ==1491242== by 0xF8AA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491242== by 0xF8AA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491242== by 0xF860922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491242== by 0xF8052DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1491242== by 0xB7EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491242== by 0xB783D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491242== by 0xA47AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1491242== by 0x9D1F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1491242== by 0x9D1F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1491242== by 0x123956: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1491242== by 0x11E4B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1491242== by 0x120CD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1491242== by 0x120BCB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1491242== by 0x1211DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1491242== by 0x11CCB5: main (TestCheckpointing.cpp:18) ==1491242== ==1491242== Open file descriptor 117: ==1491242== ==1491242== ==1491242== Open file descriptor 113: ==1491242== ==1491242== ==1491242== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==1491242== ==1491242== ==1491242== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1491242== ==1491242== ==1491242== ==1491242== HEAP SUMMARY: ==1491242== in use at exit: 858,425 bytes in 12,118 blocks ==1491242== total heap usage: 843,714 allocs, 831,596 frees, 1,648,220,737 bytes allocated ==1491242== ==1491242== LEAK SUMMARY: ==1491242== definitely lost: 0 bytes in 0 blocks ==1491242== indirectly lost: 0 bytes in 0 blocks ==1491242== possibly lost: 0 bytes in 0 blocks ==1491242== still reachable: 24 bytes in 2 blocks ==1491242== suppressed: 858,401 bytes in 12,116 blocks ==1491242== Reachable blocks (those to which a pointer was found) are not shown. ==1491242== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1491242== ==1491242== For lists of detected and suppressed errors, rerun with: -s ==1491242== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 46 from 20)