==1480621== Memcheck, a memory error detector ==1480621== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1480621== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1480621== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestPeriodicNodesOnlyMesh -malloc_debug -malloc_dump -memory_info ==1480621== Parent PID: 1480089 ==1480621== ==1480621== ==1480621== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1480621== Open file descriptor 12: ==1480621== at 0x66AA26D: pipe (pipe.c:29) ==1480621== by 0xFDFE07D: ??? ==1480621== by 0xB7224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1480621== by 0x7CB3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480621== by 0x7C4CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480621== by 0x6943D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1480621== by 0x61C8153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1480621== by 0x61C81A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1480621== by 0x12FFFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1480621== by 0x12AC5D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1480621== by 0x12D9E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1480621== by 0x12D888: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1480621== by 0x12DF1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1480621== by 0x129085: main (TestPeriodicNodesOnlyMesh.cpp:19) ==1480621== ==1480621== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1480621== at 0x66AEC0C: __open_nocancel (open64_nocancel.c:39) ==1480621== by 0x6632BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1480621== by 0x61FC822: ??? ==1480621== by 0x61FC96F: ??? ==1480621== by 0xB7C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1480621== by 0xB7C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1480621== by 0xB77D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1480621== by 0xB7222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1480621== by 0x7CB3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480621== by 0x7C4CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480621== by 0x6943D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1480621== by 0x61C8153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1480621== by 0x61C81A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1480621== by 0x12FFFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1480621== by 0x12AC5D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1480621== by 0x12D9E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1480621== by 0x12D888: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1480621== by 0x12DF1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1480621== by 0x129085: main (TestPeriodicNodesOnlyMesh.cpp:19) ==1480621== ==1480621== Open file descriptor 117: ==1480621== ==1480621== ==1480621== Open file descriptor 113: ==1480621== ==1480621== ==1480621== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodesOnlyMesh_valgrind.txt ==1480621== ==1480621== ==1480621== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1480621== ==1480621== ==1480621== ==1480621== HEAP SUMMARY: ==1480621== in use at exit: 857,896 bytes in 12,112 blocks ==1480621== total heap usage: 66,683 allocs, 54,571 frees, 1,545,501,732 bytes allocated ==1480621== ==1480621== LEAK SUMMARY: ==1480621== definitely lost: 0 bytes in 0 blocks ==1480621== indirectly lost: 0 bytes in 0 blocks ==1480621== possibly lost: 0 bytes in 0 blocks ==1480621== still reachable: 24 bytes in 2 blocks ==1480621== suppressed: 857,872 bytes in 12,110 blocks ==1480621== Reachable blocks (those to which a pointer was found) are not shown. ==1480621== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1480621== ==1480621== For lists of detected and suppressed errors, rerun with: -s ==1480621== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)