==1481398== Memcheck, a memory error detector ==1481398== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1481398== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1481398== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==1481398== Parent PID: 1480089 ==1481398== ==1481398== ==1481398== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1481398== Open file descriptor 12: ==1481398== at 0x1007626D: pipe (pipe.c:29) ==1481398== by 0x18AE307D: ??? ==1481398== by 0x140334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1481398== by 0xFCC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481398== by 0xFC5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481398== by 0xE930D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1481398== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1481398== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1481398== by 0x12945D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1481398== by 0x1249B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1481398== by 0x126EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1481398== by 0x126DC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1481398== by 0x1273D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1481398== by 0x1231B5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==1481398== ==1481398== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1481398== at 0x1007AC0C: __open_nocancel (open64_nocancel.c:39) ==1481398== by 0xFFFEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1481398== by 0xFBBA822: ??? ==1481398== by 0xFBBA96F: ??? ==1481398== by 0x140D86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481398== by 0x140D8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481398== by 0x1408E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1481398== by 0x140332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1481398== by 0xFCC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481398== by 0xFC5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1481398== by 0xE930D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1481398== by 0xE808153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1481398== by 0xE8081A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1481398== by 0x12945D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1481398== by 0x1249B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1481398== by 0x126EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1481398== by 0x126DC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1481398== by 0x1273D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1481398== by 0x1231B5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==1481398== ==1481398== Open file descriptor 117: ==1481398== ==1481398== ==1481398== Open file descriptor 113: ==1481398== ==1481398== ==1481398== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==1481398== ==1481398== ==1481398== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1481398== ==1481398== ==1481398== ==1481398== HEAP SUMMARY: ==1481398== in use at exit: 857,961 bytes in 12,109 blocks ==1481398== total heap usage: 4,545,686 allocs, 4,533,577 frees, 2,029,471,909 bytes allocated ==1481398== ==1481398== LEAK SUMMARY: ==1481398== definitely lost: 0 bytes in 0 blocks ==1481398== indirectly lost: 0 bytes in 0 blocks ==1481398== possibly lost: 0 bytes in 0 blocks ==1481398== still reachable: 56 bytes in 3 blocks ==1481398== suppressed: 857,905 bytes in 12,106 blocks ==1481398== Reachable blocks (those to which a pointer was found) are not shown. ==1481398== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1481398== ==1481398== For lists of detected and suppressed errors, rerun with: -s ==1481398== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)