==1491141== Memcheck, a memory error detector ==1491141== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1491141== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1491141== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestSpiralWaveAndPhase -malloc_debug -malloc_dump -memory_info ==1491141== Parent PID: 1480089 ==1491141== ==1491141== ==1491141== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1491141== Open file descriptor 12: ==1491141== at 0x7DF726D: pipe (pipe.c:29) ==1491141== by 0x1020F07D: ??? ==1491141== by 0xC03D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1491141== by 0x8477418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491141== by 0x8410D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491141== by 0x6701D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1491141== by 0x65D9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1491141== by 0x65D91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1491141== by 0x118F5C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1491141== by 0x114773: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1491141== by 0x116F08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1491141== by 0x116E03: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1491141== by 0x117417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1491141== by 0x112F75: main (TestSpiralWaveAndPhase.cpp:18) ==1491141== ==1491141== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1491141== at 0x7DFBC0C: __open_nocancel (open64_nocancel.c:39) ==1491141== by 0x7D7FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1491141== by 0x798B822: ??? ==1491141== by 0x798B96F: ??? ==1491141== by 0xC0E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491141== by 0xC0E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491141== by 0xC098922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1491141== by 0xC03D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1491141== by 0x8477418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491141== by 0x8410D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1491141== by 0x6701D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1491141== by 0x65D9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1491141== by 0x65D91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1491141== by 0x118F5C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1491141== by 0x114773: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1491141== by 0x116F08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1491141== by 0x116E03: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1491141== by 0x117417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1491141== by 0x112F75: main (TestSpiralWaveAndPhase.cpp:18) ==1491141== ==1491141== Open file descriptor 117: ==1491141== ==1491141== ==1491141== Open file descriptor 113: ==1491141== ==1491141== ==1491141== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSpiralWaveAndPhase_valgrind.txt ==1491141== ==1491141== ==1491141== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1491141== ==1491141== ==1491141== ==1491141== HEAP SUMMARY: ==1491141== in use at exit: 858,345 bytes in 12,118 blocks ==1491141== total heap usage: 4,360,113 allocs, 4,347,995 frees, 2,110,643,630 bytes allocated ==1491141== ==1491141== LEAK SUMMARY: ==1491141== definitely lost: 0 bytes in 0 blocks ==1491141== indirectly lost: 0 bytes in 0 blocks ==1491141== possibly lost: 0 bytes in 0 blocks ==1491141== still reachable: 24 bytes in 2 blocks ==1491141== suppressed: 858,321 bytes in 12,116 blocks ==1491141== Reachable blocks (those to which a pointer was found) are not shown. ==1491141== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1491141== ==1491141== For lists of detected and suppressed errors, rerun with: -s ==1491141== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 22 from 20)