==1489477== Memcheck, a memory error detector ==1489477== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1489477== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1489477== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestVentilationProblem -malloc_debug -malloc_dump -memory_info ==1489477== Parent PID: 1480089 ==1489477== ==1489477== ==1489477== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1489477== Open file descriptor 12: ==1489477== at 0x678626D: pipe (pipe.c:29) ==1489477== by 0x1053F07D: ??? ==1489477== by 0xBD544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1489477== by 0x7D00418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1489477== by 0x7C99D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1489477== by 0x6990D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1489477== by 0x62E8153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1489477== by 0x62E81A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1489477== by 0x1175FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1489477== by 0x112899: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1489477== by 0x115594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1489477== by 0x115434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1489477== by 0x115ACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1489477== by 0x110B15: main (TestVentilationProblem.cpp:19) ==1489477== ==1489477== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1489477== at 0x678AC0C: __open_nocancel (open64_nocancel.c:39) ==1489477== by 0x670EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1489477== by 0x631C822: ??? ==1489477== by 0x631C96F: ??? ==1489477== by 0xBDF96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1489477== by 0xBDF9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1489477== by 0xBDAF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1489477== by 0xBD542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1489477== by 0x7D00418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1489477== by 0x7C99D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1489477== by 0x6990D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1489477== by 0x62E8153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1489477== by 0x62E81A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1489477== by 0x1175FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1489477== by 0x112899: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1489477== by 0x115594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1489477== by 0x115434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1489477== by 0x115ACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1489477== by 0x110B15: main (TestVentilationProblem.cpp:19) ==1489477== ==1489477== Open file descriptor 117: ==1489477== ==1489477== ==1489477== Open file descriptor 113: ==1489477== ==1489477== ==1489477== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVentilationProblem_valgrind.txt ==1489477== ==1489477== ==1489477== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1489477== ==1489477== ==1489477== ==1489477== HEAP SUMMARY: ==1489477== in use at exit: 857,929 bytes in 12,108 blocks ==1489477== total heap usage: 5,466,829 allocs, 5,454,721 frees, 2,015,394,474 bytes allocated ==1489477== ==1489477== LEAK SUMMARY: ==1489477== definitely lost: 0 bytes in 0 blocks ==1489477== indirectly lost: 0 bytes in 0 blocks ==1489477== possibly lost: 0 bytes in 0 blocks ==1489477== still reachable: 24 bytes in 2 blocks ==1489477== suppressed: 857,905 bytes in 12,106 blocks ==1489477== Reachable blocks (those to which a pointer was found) are not shown. ==1489477== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1489477== ==1489477== For lists of detected and suppressed errors, rerun with: -s ==1489477== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 16 from 16)