==1480759== Memcheck, a memory error detector ==1480759== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1480759== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1480759== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestVertexMesh -malloc_debug -malloc_dump -memory_info ==1480759== Parent PID: 1480089 ==1480759== ==1480759== ==1480759== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1480759== Open file descriptor 12: ==1480759== at 0x7B5F26D: pipe (pipe.c:29) ==1480759== by 0xFDFE07D: ??? ==1480759== by 0xB7224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1480759== by 0x76C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480759== by 0x7660D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480759== by 0x6357D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1480759== by 0x61C8153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1480759== by 0x61C81A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1480759== by 0x143689: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1480759== by 0x13DABD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1480759== by 0x1412D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1480759== by 0x141176: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1480759== by 0x14180D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1480759== by 0x13BEE5: main (TestVertexMesh.cpp:19) ==1480759== ==1480759== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1480759== at 0x7B63C0C: __open_nocancel (open64_nocancel.c:39) ==1480759== by 0x7AE7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1480759== by 0x61FC822: ??? ==1480759== by 0x61FC96F: ??? ==1480759== by 0xB7C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1480759== by 0xB7C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1480759== by 0xB77D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1480759== by 0xB7222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1480759== by 0x76C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480759== by 0x7660D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1480759== by 0x6357D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1480759== by 0x61C8153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1480759== by 0x61C81A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1480759== by 0x143689: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1480759== by 0x13DABD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1480759== by 0x1412D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1480759== by 0x141176: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1480759== by 0x14180D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1480759== by 0x13BEE5: main (TestVertexMesh.cpp:19) ==1480759== ==1480759== Open file descriptor 117: ==1480759== ==1480759== ==1480759== Open file descriptor 113: ==1480759== ==1480759== ==1480759== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexMesh_valgrind.txt ==1480759== ==1480759== ==1480759== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1480759== ==1480759== ==1480759== ==1480759== HEAP SUMMARY: ==1480759== in use at exit: 860,448 bytes in 12,113 blocks ==1480759== total heap usage: 102,656 allocs, 90,543 frees, 1,550,935,306 bytes allocated ==1480759== ==1480759== LEAK SUMMARY: ==1480759== definitely lost: 0 bytes in 0 blocks ==1480759== indirectly lost: 0 bytes in 0 blocks ==1480759== possibly lost: 0 bytes in 0 blocks ==1480759== still reachable: 2,576 bytes in 3 blocks ==1480759== suppressed: 857,872 bytes in 12,110 blocks ==1480759== Reachable blocks (those to which a pointer was found) are not shown. ==1480759== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1480759== ==1480759== For lists of detected and suppressed errors, rerun with: -s ==1480759== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 20 from 20)