==1513323== Memcheck, a memory error detector ==1513323== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1513323== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1513323== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==1513323== Parent PID: 1512031 ==1513323== ==1513323== ==1513323== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1513323== Open file descriptor 12: ==1513323== at 0x1007126D: pipe (pipe.c:29) ==1513323== by 0x18ADE07D: ??? ==1513323== by 0x140334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1513323== by 0xFCBE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1513323== by 0xFC57D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1513323== by 0xE92BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1513323== by 0xE803153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1513323== by 0xE8031A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1513323== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1513323== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1513323== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1513323== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1513323== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1513323== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==1513323== ==1513323== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1513323== at 0x10075C0C: __open_nocancel (open64_nocancel.c:39) ==1513323== by 0xFFF9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1513323== by 0xFBB5822: ??? ==1513323== by 0xFBB596F: ??? ==1513323== by 0x140D86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1513323== by 0x140D8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1513323== by 0x1408E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1513323== by 0x140332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1513323== by 0xFCBE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1513323== by 0xFC57D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1513323== by 0xE92BD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==1513323== by 0xE803153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1513323== by 0xE8031A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1513323== by 0x12943D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1513323== by 0x124993: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1513323== by 0x126EA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1513323== by 0x126DA1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1513323== by 0x1273B5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1513323== by 0x123195: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==1513323== ==1513323== Open file descriptor 117: ==1513323== ==1513323== ==1513323== Open file descriptor 113: ==1513323== ==1513323== ==1513323== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==1513323== ==1513323== ==1513323== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1513323== ==1513323== ==1513323== ==1513323== HEAP SUMMARY: ==1513323== in use at exit: 857,961 bytes in 12,109 blocks ==1513323== total heap usage: 7,555,201 allocs, 7,543,092 frees, 2,379,067,401 bytes allocated ==1513323== ==1513323== LEAK SUMMARY: ==1513323== definitely lost: 0 bytes in 0 blocks ==1513323== indirectly lost: 0 bytes in 0 blocks ==1513323== possibly lost: 0 bytes in 0 blocks ==1513323== still reachable: 56 bytes in 3 blocks ==1513323== suppressed: 857,905 bytes in 12,106 blocks ==1513323== Reachable blocks (those to which a pointer was found) are not shown. ==1513323== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1513323== ==1513323== For lists of detected and suppressed errors, rerun with: -s ==1513323== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)