==1783208== Memcheck, a memory error detector ==1783208== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1783208== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1783208== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1783208== Parent PID: 1781628 ==1783208== ==1783208== ==1783208== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1783208== Open file descriptor 12: ==1783208== at 0xD2EB07D: pipe (pipe.c:29) ==1783208== by 0x18A2207D: ??? ==1783208== by 0x140334CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1783208== by 0x10819418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783208== by 0x107B2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783208== by 0xF4A9D38: PetscInitialize (pinit.c:924) ==1783208== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1783208== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1783208== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1783208== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1783208== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1783208== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1783208== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1783208== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1783208== ==1783208== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1783208== at 0xD2EFA1C: __open_nocancel (open64_nocancel.c:39) ==1783208== by 0xD273BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1783208== by 0xCBDA822: ??? ==1783208== by 0xCBDA96F: ??? ==1783208== by 0x140D86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783208== by 0x140D8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783208== by 0x1408E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1783208== by 0x140332DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1783208== by 0x10819418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783208== by 0x107B2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1783208== by 0xF4A9D38: PetscInitialize (pinit.c:924) ==1783208== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1783208== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1783208== by 0x132B46: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1783208== by 0x12BE43: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1783208== by 0x12E998: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1783208== by 0x12E893: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1783208== by 0x12EEA7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1783208== by 0x12A645: main (TestCaUpdateRules.cpp:18) ==1783208== ==1783208== Open file descriptor 116: ==1783208== ==1783208== ==1783208== Open file descriptor 112: ==1783208== ==1783208== ==1783208== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1783208== ==1783208== ==1783208== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1783208== ==1783208== ==1783208== ==1783208== HEAP SUMMARY: ==1783208== in use at exit: 835,633 bytes in 11,677 blocks ==1783208== total heap usage: 63,583 allocs, 51,906 frees, 1,540,880,068 bytes allocated ==1783208== ==1783208== LEAK SUMMARY: ==1783208== definitely lost: 0 bytes in 0 blocks ==1783208== indirectly lost: 0 bytes in 0 blocks ==1783208== possibly lost: 0 bytes in 0 blocks ==1783208== still reachable: 56 bytes in 3 blocks ==1783208== suppressed: 835,577 bytes in 11,674 blocks ==1783208== Reachable blocks (those to which a pointer was found) are not shown. ==1783208== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1783208== ==1783208== For lists of detected and suppressed errors, rerun with: -s ==1783208== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)